Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 SART3-203ENST00000546611 1184 ntBASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 AC073592.5-201ENST00000624854 528 ntBASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 HLA-A-201ENST00000376802 1334 ntBASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.6□□□□□ -0.07
SSBP3Q9BWW4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 AC018712.1-201ENST00000455767 687 ntBASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 AC021087.4-201ENST00000563761 564 ntBASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 AC079776.2-201ENST00000641154 1609 ntBASIC14.59□□□□□ -0.07
SSBP3Q9BWW4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SSBP3Q9BWW4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
SSBP3Q9BWW4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
SSBP3Q9BWW4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SSBP3Q9BWW4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SSBP3Q9BWW4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
SSBP3Q9BWW4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 AL353593.2-201ENST00000602529 1483 ntBASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP3Q9BWW4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms