Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 TSPY14P-201ENST00000303979 915 ntBASIC17.04■□□□□ 0.32
EBF4Q9BQW3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 UBE2SP1-201ENST00000450587 669 ntBASIC17.04■□□□□ 0.32
EBF4Q9BQW3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 C2orf69P3-201ENST00000565542 1120 ntBASIC17.04■□□□□ 0.32
EBF4Q9BQW3 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 Z99916.2-201ENST00000604037 246 ntBASIC17.04■□□□□ 0.32
EBF4Q9BQW3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.04■□□□□ 0.32
EBF4Q9BQW3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 FAM201B-201ENST00000458407 597 ntBASIC17.03■□□□□ 0.32
EBF4Q9BQW3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 AC112698.1-201ENST00000510299 916 ntBASIC17.03■□□□□ 0.32
EBF4Q9BQW3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF4Q9BQW3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
EBF4Q9BQW3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
EBF4Q9BQW3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EBF4Q9BQW3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EBF4Q9BQW3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EBF4Q9BQW3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
EBF4Q9BQW3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
EBF4Q9BQW3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
EBF4Q9BQW3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
EBF4Q9BQW3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EBF4Q9BQW3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
EBF4Q9BQW3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EBF4Q9BQW3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
EBF4Q9BQW3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
EBF4Q9BQW3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EBF4Q9BQW3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.02■□□□□ 0.32
EBF4Q9BQW3 AL158047.1-201ENST00000445918 881 ntBASIC17.02■□□□□ 0.32
EBF4Q9BQW3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.02■□□□□ 0.32
EBF4Q9BQW3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.02■□□□□ 0.32
EBF4Q9BQW3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.02■□□□□ 0.32
EBF4Q9BQW3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EBF4Q9BQW3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms