Protein–RNA interactions for Protein: Q9BQJ4

TMEM47, Transmembrane protein 47, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47Q9BQJ4 PTCHD3P3-201ENST00000403073 906 ntBASIC20.24■□□□□ 0.83
TMEM47Q9BQJ4 RPS15P9-201ENST00000494093 319 ntBASIC20.24■□□□□ 0.83
TMEM47Q9BQJ4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM47Q9BQJ4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
TMEM47Q9BQJ4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
TMEM47Q9BQJ4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM47Q9BQJ4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM47Q9BQJ4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TMEM47Q9BQJ4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM47Q9BQJ4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 AC008667.4-201ENST00000607370 168 ntBASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 AL805961.1-202ENST00000641562 540 ntBASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM47Q9BQJ4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 PMS2P1-201ENST00000431037 1228 ntBASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 AC108751.1-201ENST00000490852 363 ntBASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 IGHV3-65-201ENST00000523210 341 ntBASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM47Q9BQJ4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms