Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NEK1Q96PY6 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEK1Q96PY6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.67■□□□□ 0.9
NEK1Q96PY6 PMPCAP1-201ENST00000508114 1576 ntBASIC20.67■□□□□ 0.9
NEK1Q96PY6 AC009336.1-201ENST00000608941 1553 ntBASIC20.67■□□□□ 0.9
NEK1Q96PY6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
NEK1Q96PY6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEK1Q96PY6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEK1Q96PY6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NEK1Q96PY6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEK1Q96PY6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NEK1Q96PY6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NEK1Q96PY6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEK1Q96PY6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
NEK1Q96PY6 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NEK1Q96PY6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEK1Q96PY6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.66■□□□□ 0.9
NEK1Q96PY6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
NEK1Q96PY6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEK1Q96PY6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.66■□□□□ 0.9
NEK1Q96PY6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.66■□□□□ 0.9
NEK1Q96PY6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NEK1Q96PY6 AP000867.4-201ENST00000641616 219 ntBASIC20.66■□□□□ 0.9
NEK1Q96PY6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NEK1Q96PY6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NEK1Q96PY6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEK1Q96PY6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NEK1Q96PY6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
NEK1Q96PY6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEK1Q96PY6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEK1Q96PY6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEK1Q96PY6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.65■□□□□ 0.9
NEK1Q96PY6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEK1Q96PY6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NEK1Q96PY6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
NEK1Q96PY6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.65■□□□□ 0.9
NEK1Q96PY6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEK1Q96PY6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEK1Q96PY6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
NEK1Q96PY6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEK1Q96PY6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NEK1Q96PY6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEK1Q96PY6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.65■□□□□ 0.9
NEK1Q96PY6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NEK1Q96PY6 AC003669.1-201ENST00000334569 611 ntBASIC20.65■□□□□ 0.9
NEK1Q96PY6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
NEK1Q96PY6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
NEK1Q96PY6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.65■□□□□ 0.9
NEK1Q96PY6 SLC25A1P3-201ENST00000395415 828 ntBASIC20.65■□□□□ 0.9
NEK1Q96PY6 HCG4P8-203ENST00000443049 980 ntBASIC20.65■□□□□ 0.9
NEK1Q96PY6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NEK1Q96PY6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEK1Q96PY6 AL121894.2-201ENST00000602977 491 ntBASIC20.65■□□□□ 0.9
NEK1Q96PY6 AC138894.3-201ENST00000603787 634 ntBASIC20.65■□□□□ 0.9
NEK1Q96PY6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.65■□□□□ 0.9
NEK1Q96PY6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.65■□□□□ 0.9
NEK1Q96PY6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NEK1Q96PY6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NEK1Q96PY6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEK1Q96PY6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEK1Q96PY6 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
NEK1Q96PY6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEK1Q96PY6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NEK1Q96PY6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.65■□□□□ 0.9
NEK1Q96PY6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEK1Q96PY6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
NEK1Q96PY6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
NEK1Q96PY6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NEK1Q96PY6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NEK1Q96PY6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.64■□□□□ 0.9
NEK1Q96PY6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NEK1Q96PY6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NEK1Q96PY6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.64■□□□□ 0.9
NEK1Q96PY6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NEK1Q96PY6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NEK1Q96PY6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NEK1Q96PY6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NEK1Q96PY6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NEK1Q96PY6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.64■□□□□ 0.89
NEK1Q96PY6 TPM4P1-201ENST00000436100 807 ntBASIC20.64■□□□□ 0.89
NEK1Q96PY6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.64■□□□□ 0.89
NEK1Q96PY6 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.64■□□□□ 0.89
NEK1Q96PY6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.64■□□□□ 0.89
NEK1Q96PY6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
NEK1Q96PY6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.64■□□□□ 0.89
NEK1Q96PY6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.64■□□□□ 0.89
NEK1Q96PY6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.64■□□□□ 0.89
NEK1Q96PY6 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.64■□□□□ 0.89
NEK1Q96PY6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NEK1Q96PY6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
NEK1Q96PY6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
NEK1Q96PY6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.64■□□□□ 0.89
NEK1Q96PY6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.64■□□□□ 0.89
NEK1Q96PY6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NEK1Q96PY6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.64■□□□□ 0.89
NEK1Q96PY6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NEK1Q96PY6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEK1Q96PY6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEK1Q96PY6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEK1Q96PY6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms