Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.64■■□□□ 1.05
CCDC85AQ96PX6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC21.64■■□□□ 1.05
CCDC85AQ96PX6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.64■■□□□ 1.05
CCDC85AQ96PX6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.64■■□□□ 1.05
CCDC85AQ96PX6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC85AQ96PX6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC85AQ96PX6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC85AQ96PX6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CCDC85AQ96PX6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC85AQ96PX6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC85AQ96PX6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC85AQ96PX6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC85AQ96PX6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.64■■□□□ 1.05
CCDC85AQ96PX6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC85AQ96PX6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 ALG1L5P-201ENST00000482043 771 ntBASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC85AQ96PX6 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
CCDC85AQ96PX6 HCG11-201ENST00000411553 5696 ntBASIC21.62■■□□□ 1.05
CCDC85AQ96PX6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC85AQ96PX6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC85AQ96PX6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC85AQ96PX6 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC85AQ96PX6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC85AQ96PX6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC85AQ96PX6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC85AQ96PX6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC85AQ96PX6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC21.62■■□□□ 1.05
CCDC85AQ96PX6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC85AQ96PX6 AL805961.1-202ENST00000641562 540 ntBASIC21.62■■□□□ 1.05
CCDC85AQ96PX6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC85AQ96PX6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CCDC85AQ96PX6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC85AQ96PX6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CCDC85AQ96PX6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC85AQ96PX6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC85AQ96PX6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC85AQ96PX6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC85AQ96PX6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 AL354751.1-201ENST00000412768 1863 ntBASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 AC004967.1-201ENST00000453589 447 ntBASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 OR7E47P-204ENST00000575924 449 ntBASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.61■■□□□ 1.05
CCDC85AQ96PX6 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms