Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ITCHQ96J02 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ITCHQ96J02 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ITCHQ96J02 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ITCHQ96J02 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ITCHQ96J02 AC096633.1-201ENST00000422446 749 ntBASIC16.66■□□□□ 0.26
ITCHQ96J02 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ITCHQ96J02 AC068472.1-201ENST00000474589 881 ntBASIC16.66■□□□□ 0.26
ITCHQ96J02 AC002558.1-201ENST00000488906 803 ntBASIC16.66■□□□□ 0.26
ITCHQ96J02 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.66■□□□□ 0.26
ITCHQ96J02 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ITCHQ96J02 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.66■□□□□ 0.26
ITCHQ96J02 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.66■□□□□ 0.26
ITCHQ96J02 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.66■□□□□ 0.26
ITCHQ96J02 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ITCHQ96J02 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
ITCHQ96J02 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ITCHQ96J02 AL118508.1-201ENST00000613502 2345 ntBASIC16.66■□□□□ 0.26
ITCHQ96J02 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ITCHQ96J02 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ITCHQ96J02 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ITCHQ96J02 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ITCHQ96J02 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ITCHQ96J02 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.66■□□□□ 0.26
ITCHQ96J02 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.66■□□□□ 0.26
ITCHQ96J02 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ITCHQ96J02 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ITCHQ96J02 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ITCHQ96J02 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ITCHQ96J02 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ITCHQ96J02 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ITCHQ96J02 AC060834.1-201ENST00000443027 2032 ntBASIC16.65■□□□□ 0.26
ITCHQ96J02 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
ITCHQ96J02 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ITCHQ96J02 AC106886.4-201ENST00000623557 2502 ntBASIC16.65■□□□□ 0.26
ITCHQ96J02 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ITCHQ96J02 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ITCHQ96J02 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ITCHQ96J02 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ITCHQ96J02 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.65■□□□□ 0.26
ITCHQ96J02 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.65■□□□□ 0.26
ITCHQ96J02 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.65■□□□□ 0.26
ITCHQ96J02 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ITCHQ96J02 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ITCHQ96J02 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.65■□□□□ 0.26
ITCHQ96J02 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.65■□□□□ 0.26
ITCHQ96J02 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ITCHQ96J02 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ITCHQ96J02 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
ITCHQ96J02 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.65■□□□□ 0.26
ITCHQ96J02 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.65■□□□□ 0.26
ITCHQ96J02 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.65■□□□□ 0.26
ITCHQ96J02 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ITCHQ96J02 GPR32P1-201ENST00000601788 811 ntBASIC16.65■□□□□ 0.26
ITCHQ96J02 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.65■□□□□ 0.26
ITCHQ96J02 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ITCHQ96J02 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ITCHQ96J02 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ITCHQ96J02 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.65■□□□□ 0.26
ITCHQ96J02 NFIC-211ENST00000641145 8399 ntBASIC16.65■□□□□ 0.26
ITCHQ96J02 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ITCHQ96J02 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ITCHQ96J02 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.65■□□□□ 0.26
ITCHQ96J02 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
ITCHQ96J02 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ITCHQ96J02 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.65■□□□□ 0.26
ITCHQ96J02 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
ITCHQ96J02 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
ITCHQ96J02 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.64■□□□□ 0.26
ITCHQ96J02 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
ITCHQ96J02 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ITCHQ96J02 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ITCHQ96J02 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ITCHQ96J02 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
ITCHQ96J02 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ITCHQ96J02 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.64■□□□□ 0.25
ITCHQ96J02 PCDH8P1-201ENST00000428983 2773 ntBASIC16.64■□□□□ 0.25
ITCHQ96J02 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ITCHQ96J02 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ITCHQ96J02 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ITCHQ96J02 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.64■□□□□ 0.25
ITCHQ96J02 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
ITCHQ96J02 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ITCHQ96J02 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ITCHQ96J02 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ITCHQ96J02 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ITCHQ96J02 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
ITCHQ96J02 AC087499.1-201ENST00000418141 1075 ntBASIC16.64■□□□□ 0.25
ITCHQ96J02 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.64■□□□□ 0.25
ITCHQ96J02 AC092597.1-201ENST00000487352 616 ntBASIC16.64■□□□□ 0.25
ITCHQ96J02 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.64■□□□□ 0.25
ITCHQ96J02 AC010203.1-204ENST00000548782 407 ntBASIC16.64■□□□□ 0.25
ITCHQ96J02 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.64■□□□□ 0.25
ITCHQ96J02 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.64■□□□□ 0.25
ITCHQ96J02 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.64■□□□□ 0.25
ITCHQ96J02 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.64■□□□□ 0.25
ITCHQ96J02 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.64■□□□□ 0.25
ITCHQ96J02 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.64■□□□□ 0.25
ITCHQ96J02 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ITCHQ96J02 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms