Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40AQ8WXH6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40AQ8WXH6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40AQ8WXH6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RAB40AQ8WXH6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RAB40AQ8WXH6 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB40AQ8WXH6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RAB40AQ8WXH6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB40AQ8WXH6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40AQ8WXH6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40AQ8WXH6 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB40AQ8WXH6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
RAB40AQ8WXH6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 UBALD1-205ENST00000590891 2641 ntBASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 AL358472.4-201ENST00000633140 710 ntBASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 AC016396.2-201ENST00000562575 1417 ntBASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 AC046158.3-201ENST00000624947 2558 ntBASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 AL139384.1-201ENST00000612143 3047 ntBASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40AQ8WXH6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 KRT18P23-201ENST00000435622 1283 ntBASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 RASA4DP-201ENST00000460726 1199 ntBASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 MIR3180-4-201ENST00000582223 153 ntBASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 AC132938.6-201ENST00000623828 1655 ntBASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40AQ8WXH6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms