Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SLC44A1Q8WWI5 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SLC44A1Q8WWI5 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.52■□□□□ 0.39
SLC44A1Q8WWI5 AL603756.1-201ENST00000606511 2163 ntBASIC17.52■□□□□ 0.39
SLC44A1Q8WWI5 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.52■□□□□ 0.39
SLC44A1Q8WWI5 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC44A1Q8WWI5 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SLC44A1Q8WWI5 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC44A1Q8WWI5 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 RNF216P1-203ENST00000404404 2427 ntBASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 MYCLP1-201ENST00000372451 1075 ntBASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 AC010203.1-204ENST00000548782 407 ntBASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 AC019129.2-201ENST00000609837 1235 ntBASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 AC078925.2-201ENST00000624013 1973 ntBASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC44A1Q8WWI5 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 AC011558.1-201ENST00000623459 338 ntBASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC44A1Q8WWI5 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC44A1Q8WWI5 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC44A1Q8WWI5 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC44A1Q8WWI5 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC44A1Q8WWI5 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
SLC44A1Q8WWI5 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
SLC44A1Q8WWI5 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC44A1Q8WWI5 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC44A1Q8WWI5 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SLC44A1Q8WWI5 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC44A1Q8WWI5 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC44A1Q8WWI5 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC44A1Q8WWI5 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC44A1Q8WWI5 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC44A1Q8WWI5 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC44A1Q8WWI5 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms