Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 FLJ38576-201ENST00000623820 2459 ntBASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 TBC1D3P5-201ENST00000579401 1545 ntBASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 PC-208ENST00000529047 1607 ntTSL 3 BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 AC093525.9-201ENST00000624961 1746 ntBASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 MMP23A-201ENST00000234610 1017 ntBASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 FAM8A6P-201ENST00000407496 1135 ntBASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 HLA-F-220ENST00000434407 884 ntBASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 MTCL1P1-201ENST00000446207 792 ntBASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 RASA4DP-201ENST00000460726 1199 ntBASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 IGHV3-52-201ENST00000519770 353 ntBASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 AL355075.4-201ENST00000554988 638 ntBASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 TK1-204ENST00000590430 683 ntTSL 3 BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 CROCCP1-201ENST00000426910 5675 ntBASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC11.75□□□□□ -0.53
LINC01561Q8N1V8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms