Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC23.94■■□□□ 1.42
XRN1Q8IZH2 U1.21-201ENST00000580816 167 ntBASIC23.94■■□□□ 1.42
XRN1Q8IZH2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
XRN1Q8IZH2 AL031055.1-201ENST00000606362 631 ntBASIC23.94■■□□□ 1.42
XRN1Q8IZH2 AL139327.4-201ENST00000612362 153 ntBASIC23.94■■□□□ 1.42
XRN1Q8IZH2 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
XRN1Q8IZH2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
XRN1Q8IZH2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 AC100757.3-201ENST00000622361 1406 ntBASIC23.93■■□□□ 1.42
XRN1Q8IZH2 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 SPDYE12P-201ENST00000618416 771 ntBASIC23.93■■□□□ 1.42
XRN1Q8IZH2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
XRN1Q8IZH2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
XRN1Q8IZH2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC23.92■■□□□ 1.42
XRN1Q8IZH2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC23.92■■□□□ 1.42
XRN1Q8IZH2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
XRN1Q8IZH2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
XRN1Q8IZH2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
XRN1Q8IZH2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC23.92■■□□□ 1.42
XRN1Q8IZH2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
XRN1Q8IZH2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC23.92■■□□□ 1.42
XRN1Q8IZH2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
XRN1Q8IZH2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC23.92■■□□□ 1.42
XRN1Q8IZH2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC23.92■■□□□ 1.42
XRN1Q8IZH2 COQ6-210ENST00000554920 649 ntTSL 3 BASIC23.92■■□□□ 1.42
XRN1Q8IZH2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
XRN1Q8IZH2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
XRN1Q8IZH2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
XRN1Q8IZH2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC23.91■■□□□ 1.42
XRN1Q8IZH2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC23.91■■□□□ 1.42
XRN1Q8IZH2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC23.91■■□□□ 1.42
XRN1Q8IZH2 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
XRN1Q8IZH2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
XRN1Q8IZH2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC23.91■■□□□ 1.42
XRN1Q8IZH2 HLA-DQB1-201ENST00000374943 1656 ntBASIC23.91■■□□□ 1.42
XRN1Q8IZH2 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC23.91■■□□□ 1.42
XRN1Q8IZH2 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC23.91■■□□□ 1.42
XRN1Q8IZH2 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC23.91■■□□□ 1.42
XRN1Q8IZH2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
XRN1Q8IZH2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
XRN1Q8IZH2 REXO1L9P-201ENST00000604264 2108 ntBASIC23.91■■□□□ 1.42
XRN1Q8IZH2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
XRN1Q8IZH2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
XRN1Q8IZH2 WIZP1-201ENST00000531444 2299 ntBASIC23.91■■□□□ 1.42
XRN1Q8IZH2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
XRN1Q8IZH2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC23.91■■□□□ 1.42
XRN1Q8IZH2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 AC241585.1-201ENST00000433527 519 ntBASIC23.9■■□□□ 1.42
XRN1Q8IZH2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
XRN1Q8IZH2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms