Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CHPFQ8IZ52 AC023274.1-201ENST00000418278 595 ntBASIC17.78■□□□□ 0.44
CHPFQ8IZ52 DDX43P3-201ENST00000441064 443 ntBASIC17.78■□□□□ 0.44
CHPFQ8IZ52 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.78■□□□□ 0.44
CHPFQ8IZ52 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.78■□□□□ 0.44
CHPFQ8IZ52 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.78■□□□□ 0.44
CHPFQ8IZ52 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.78■□□□□ 0.44
CHPFQ8IZ52 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.78■□□□□ 0.44
CHPFQ8IZ52 AC055717.3-201ENST00000622967 595 ntBASIC17.78■□□□□ 0.44
CHPFQ8IZ52 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.78■□□□□ 0.44
CHPFQ8IZ52 AC006504.4-201ENST00000592118 1568 ntBASIC17.78■□□□□ 0.44
CHPFQ8IZ52 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHPFQ8IZ52 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CHPFQ8IZ52 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.78■□□□□ 0.44
CHPFQ8IZ52 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHPFQ8IZ52 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CHPFQ8IZ52 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHPFQ8IZ52 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.77■□□□□ 0.44
CHPFQ8IZ52 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.77■□□□□ 0.44
CHPFQ8IZ52 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
CHPFQ8IZ52 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CHPFQ8IZ52 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHPFQ8IZ52 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHPFQ8IZ52 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
CHPFQ8IZ52 AP000997.3-201ENST00000623333 2250 ntBASIC17.77■□□□□ 0.44
CHPFQ8IZ52 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHPFQ8IZ52 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHPFQ8IZ52 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
CHPFQ8IZ52 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHPFQ8IZ52 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.77■□□□□ 0.44
CHPFQ8IZ52 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.77■□□□□ 0.44
CHPFQ8IZ52 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.77■□□□□ 0.44
CHPFQ8IZ52 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHPFQ8IZ52 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.77■□□□□ 0.44
CHPFQ8IZ52 STK19B-204ENST00000512515 211 ntBASIC17.77■□□□□ 0.44
CHPFQ8IZ52 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHPFQ8IZ52 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.77■□□□□ 0.44
CHPFQ8IZ52 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.77■□□□□ 0.44
CHPFQ8IZ52 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.77■□□□□ 0.44
CHPFQ8IZ52 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.77■□□□□ 0.44
CHPFQ8IZ52 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHPFQ8IZ52 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.77■□□□□ 0.44
CHPFQ8IZ52 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHPFQ8IZ52 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.77■□□□□ 0.43
CHPFQ8IZ52 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.77■□□□□ 0.43
CHPFQ8IZ52 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CHPFQ8IZ52 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.77■□□□□ 0.43
CHPFQ8IZ52 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHPFQ8IZ52 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHPFQ8IZ52 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 AC004832.2-201ENST00000426397 482 ntBASIC17.76■□□□□ 0.43
CHPFQ8IZ52 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.76■□□□□ 0.43
CHPFQ8IZ52 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms