Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.86■□□□□ 0.13
CROCCP3Q8IVE0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 NORAD-201ENST00000565493 5339 ntBASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 MIR564-202ENST00000385049 94 ntBASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 AC034236.2-201ENST00000606662 1610 ntBASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CROCCP3Q8IVE0 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 LINC00304-203ENST00000565008 1864 ntBASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CROCCP3Q8IVE0 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms