Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RNF135Q8IUD6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF135Q8IUD6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RNF135Q8IUD6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF135Q8IUD6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF135Q8IUD6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF135Q8IUD6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF135Q8IUD6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RNF135Q8IUD6 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF135Q8IUD6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF135Q8IUD6 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF135Q8IUD6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF135Q8IUD6 TSEN15P1-201ENST00000423257 515 ntBASIC18.52■□□□□ 0.56
RNF135Q8IUD6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF135Q8IUD6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RNF135Q8IUD6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF135Q8IUD6 AC138761.1-201ENST00000584393 385 ntBASIC18.52■□□□□ 0.56
RNF135Q8IUD6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF135Q8IUD6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF135Q8IUD6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF135Q8IUD6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF135Q8IUD6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF135Q8IUD6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
RNF135Q8IUD6 AC079776.2-201ENST00000641154 1609 ntBASIC18.52■□□□□ 0.55
RNF135Q8IUD6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
RNF135Q8IUD6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF135Q8IUD6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF135Q8IUD6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.52■□□□□ 0.55
RNF135Q8IUD6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF135Q8IUD6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 AC018845.2-201ENST00000568326 409 ntBASIC18.51■□□□□ 0.55
RNF135Q8IUD6 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 AC005332.8-201ENST00000622750 2735 ntBASIC18.51■□□□□ 0.55
RNF135Q8IUD6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 GMCL1P1-201ENST00000463439 1581 ntBASIC18.51■□□□□ 0.55
RNF135Q8IUD6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF135Q8IUD6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 AL133373.2-201ENST00000623187 2828 ntBASIC18.5■□□□□ 0.55
RNF135Q8IUD6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 AC093512.1-201ENST00000617969 520 ntBASIC18.5■□□□□ 0.55
RNF135Q8IUD6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 AL354751.1-201ENST00000412768 1863 ntBASIC18.5■□□□□ 0.55
RNF135Q8IUD6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF135Q8IUD6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 AC135776.1-201ENST00000319817 2481 ntBASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms