Protein–RNA interactions for Protein: Q86WT1

TTC30A, Tetratricopeptide repeat protein 30A, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC30AQ86WT1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 MTDHP3-201ENST00000594186 672 ntBASIC18.53■□□□□ 0.56
TTC30AQ86WT1 AC008608.2-201ENST00000606089 416 ntBASIC18.53■□□□□ 0.56
TTC30AQ86WT1 AL139327.4-201ENST00000612362 153 ntBASIC18.53■□□□□ 0.56
TTC30AQ86WT1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TTC30AQ86WT1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
TTC30AQ86WT1 AC148477.5-201ENST00000625164 1645 ntBASIC18.52■□□□□ 0.56
TTC30AQ86WT1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TTC30AQ86WT1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.52■□□□□ 0.56
TTC30AQ86WT1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TTC30AQ86WT1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TTC30AQ86WT1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TTC30AQ86WT1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TTC30AQ86WT1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TTC30AQ86WT1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TTC30AQ86WT1 PP12613-201ENST00000424958 2230 ntBASIC18.52■□□□□ 0.56
TTC30AQ86WT1 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TTC30AQ86WT1 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TTC30AQ86WT1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TTC30AQ86WT1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TTC30AQ86WT1 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.52■□□□□ 0.56
TTC30AQ86WT1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TTC30AQ86WT1 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.52■□□□□ 0.56
TTC30AQ86WT1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.52■□□□□ 0.56
TTC30AQ86WT1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.52■□□□□ 0.56
TTC30AQ86WT1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.52■□□□□ 0.56
TTC30AQ86WT1 GPALPP1-207ENST00000611650 899 ntBASIC18.52■□□□□ 0.56
TTC30AQ86WT1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TTC30AQ86WT1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.52■□□□□ 0.56
TTC30AQ86WT1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TTC30AQ86WT1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TTC30AQ86WT1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TTC30AQ86WT1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.52■□□□□ 0.55
TTC30AQ86WT1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.52■□□□□ 0.55
TTC30AQ86WT1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TTC30AQ86WT1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
TTC30AQ86WT1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
TTC30AQ86WT1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.52■□□□□ 0.55
TTC30AQ86WT1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.52■□□□□ 0.55
TTC30AQ86WT1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
TTC30AQ86WT1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC30AQ86WT1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC30AQ86WT1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
TTC30AQ86WT1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TTC30AQ86WT1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.51■□□□□ 0.55
TTC30AQ86WT1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC30AQ86WT1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TTC30AQ86WT1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC30AQ86WT1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.51■□□□□ 0.55
TTC30AQ86WT1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.51■□□□□ 0.55
TTC30AQ86WT1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC30AQ86WT1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.51■□□□□ 0.55
TTC30AQ86WT1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC30AQ86WT1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC30AQ86WT1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC30AQ86WT1 MYCLP1-201ENST00000372451 1075 ntBASIC18.51■□□□□ 0.55
TTC30AQ86WT1 KLF4P1-201ENST00000412782 1185 ntBASIC18.51■□□□□ 0.55
TTC30AQ86WT1 SPDYE21P-201ENST00000413323 827 ntBASIC18.51■□□□□ 0.55
TTC30AQ86WT1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.51■□□□□ 0.55
TTC30AQ86WT1 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TTC30AQ86WT1 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.51■□□□□ 0.55
TTC30AQ86WT1 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC30AQ86WT1 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.51■□□□□ 0.55
TTC30AQ86WT1 AC023511.2-201ENST00000618803 211 ntBASIC18.51■□□□□ 0.55
TTC30AQ86WT1 AC073592.4-201ENST00000623827 446 ntBASIC18.51■□□□□ 0.55
TTC30AQ86WT1 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TTC30AQ86WT1 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.51■□□□□ 0.55
TTC30AQ86WT1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC30AQ86WT1 AC079776.2-201ENST00000641154 1609 ntBASIC18.51■□□□□ 0.55
TTC30AQ86WT1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC30AQ86WT1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC30AQ86WT1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TTC30AQ86WT1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms