Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC25Q86WR0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC25Q86WR0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC25Q86WR0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC25Q86WR0 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC25Q86WR0 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC25Q86WR0 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC25Q86WR0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC25Q86WR0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC25Q86WR0 AC008741.2-201ENST00000612792 3115 ntBASIC18.07■□□□□ 0.48
CCDC25Q86WR0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC25Q86WR0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC25Q86WR0 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
CCDC25Q86WR0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC25Q86WR0 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC25Q86WR0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC25Q86WR0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 AC128688.1-201ENST00000487626 519 ntBASIC18.06■□□□□ 0.48
CCDC25Q86WR0 AC113404.2-201ENST00000507884 177 ntBASIC18.06■□□□□ 0.48
CCDC25Q86WR0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 AC016396.2-201ENST00000562575 1417 ntBASIC18.06■□□□□ 0.48
CCDC25Q86WR0 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC25Q86WR0 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CCDC25Q86WR0 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC25Q86WR0 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC25Q86WR0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC25Q86WR0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC25Q86WR0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC25Q86WR0 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC25Q86WR0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC25Q86WR0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC25Q86WR0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC25Q86WR0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC25Q86WR0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC25Q86WR0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms