Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 FAM87A-204ENST00000613235 858 ntBASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 AC004263.2-201ENST00000617183 678 ntBASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 RNF216P1-203ENST00000404404 2427 ntBASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 AC093525.9-201ENST00000624961 1746 ntBASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 CYP2D8P-201ENST00000433633 1490 ntBASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.19■□□□□ 0.02
LRRTM1Q86UE6 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 AC078925.2-201ENST00000624013 1973 ntBASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 AL162727.3-201ENST00000635661 2787 ntBASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM1Q86UE6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms