Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 AL645608.8-201ENST00000606034 2086 ntBASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 ZNF444P1-201ENST00000559497 298 ntBASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 AL441883.1-201ENST00000566170 1045 ntBASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 AC073912.3-201ENST00000624414 853 ntBASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL55Q7Z7F7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC11.27□□□□□ -0.6
MRPL55Q7Z7F7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
MRPL55Q7Z7F7 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
MRPL55Q7Z7F7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC11.27□□□□□ -0.6
MRPL55Q7Z7F7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
MRPL55Q7Z7F7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
MRPL55Q7Z7F7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
MRPL55Q7Z7F7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
MRPL55Q7Z7F7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
MRPL55Q7Z7F7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
MRPL55Q7Z7F7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 PP12613-201ENST00000424958 2230 ntBASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 AP003733.1-201ENST00000491725 852 ntBASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 AC004263.2-201ENST00000617183 678 ntBASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 AC079602.3-201ENST00000623931 403 ntBASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 ANKRD20A8P-203ENST00000641373 517 ntBASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms