Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHISA2Q6UWI4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHISA2Q6UWI4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHISA2Q6UWI4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHISA2Q6UWI4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHISA2Q6UWI4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHISA2Q6UWI4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
SHISA2Q6UWI4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 AC132938.5-201ENST00000624980 1813 ntBASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 PTCHD3P3-201ENST00000403073 906 ntBASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 CNN2P2-201ENST00000443536 909 ntBASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 CNN2P3-201ENST00000450201 906 ntBASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 AC012645.4-201ENST00000610691 1061 ntBASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 AL136317.3-201ENST00000618497 906 ntBASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA2Q6UWI4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 CXCL1P1-201ENST00000502804 216 ntBASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 AC005225.4-201ENST00000557330 545 ntBASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.54□□□□□ -0.24
SHISA2Q6UWI4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA2Q6UWI4 AC148477.5-201ENST00000625164 1645 ntBASIC13.53□□□□□ -0.24
SHISA2Q6UWI4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA2Q6UWI4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC13.53□□□□□ -0.24
SHISA2Q6UWI4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.53□□□□□ -0.24
SHISA2Q6UWI4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA2Q6UWI4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA2Q6UWI4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
SHISA2Q6UWI4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA2Q6UWI4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA2Q6UWI4 SIRPAP1-201ENST00000448467 1770 ntBASIC13.53□□□□□ -0.24
SHISA2Q6UWI4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA2Q6UWI4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms