Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 AC009533.2-201ENST00000543664 586 ntBASIC19.69■□□□□ 0.74
SHC4Q6S5L8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC4Q6S5L8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 FAM210CP-201ENST00000445714 574 ntBASIC19.68■□□□□ 0.74
SHC4Q6S5L8 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 TSSC2-201ENST00000450217 709 ntBASIC19.68■□□□□ 0.74
SHC4Q6S5L8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 TPSP2-201ENST00000561760 610 ntBASIC19.68■□□□□ 0.74
SHC4Q6S5L8 AC111152.3-201ENST00000569699 673 ntBASIC19.68■□□□□ 0.74
SHC4Q6S5L8 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 FLJ38576-201ENST00000623820 2459 ntBASIC19.68■□□□□ 0.74
SHC4Q6S5L8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 AC233702.3-201ENST00000578656 1387 ntBASIC19.68■□□□□ 0.74
SHC4Q6S5L8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHC4Q6S5L8 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 PCED1CP-201ENST00000419887 785 ntBASIC19.67■□□□□ 0.74
SHC4Q6S5L8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 AD001527.2-201ENST00000622994 785 ntBASIC19.67■□□□□ 0.74
SHC4Q6S5L8 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SHC4Q6S5L8 TP73-AS1-210ENST00000637775 1455 ntBASIC19.67■□□□□ 0.74
SHC4Q6S5L8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SHC4Q6S5L8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHC4Q6S5L8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms