Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.27■□□□□ 0.52
FOXR1Q6PIV2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXR1Q6PIV2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXR1Q6PIV2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXR1Q6PIV2 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXR1Q6PIV2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXR1Q6PIV2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
FOXR1Q6PIV2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXR1Q6PIV2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXR1Q6PIV2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.27■□□□□ 0.52
FOXR1Q6PIV2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
FOXR1Q6PIV2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.27■□□□□ 0.52
FOXR1Q6PIV2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.27■□□□□ 0.52
FOXR1Q6PIV2 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXR1Q6PIV2 AC068587.9-201ENST00000641814 219 ntBASIC18.27■□□□□ 0.52
FOXR1Q6PIV2 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXR1Q6PIV2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXR1Q6PIV2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
FOXR1Q6PIV2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
FOXR1Q6PIV2 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
FOXR1Q6PIV2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
FOXR1Q6PIV2 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
FOXR1Q6PIV2 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
FOXR1Q6PIV2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
FOXR1Q6PIV2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 LINC01311-201ENST00000565162 1445 ntBASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 ZNF444P1-201ENST00000559497 298 ntBASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 GCSHP2-201ENST00000560971 527 ntBASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 AC012313.10-201ENST00000623509 926 ntBASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXR1Q6PIV2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 AC112777.1-201ENST00000540175 1423 ntBASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXR1Q6PIV2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXR1Q6PIV2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.24■□□□□ 0.51
FOXR1Q6PIV2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXR1Q6PIV2 KRT8P11-201ENST00000409686 1436 ntBASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms