Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 LYSMD4-203ENST00000378904 2122 ntBASIC17.85■□□□□ 0.45
CASC4Q6P4E1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 AL390719.2-201ENST00000606993 987 ntBASIC17.85■□□□□ 0.45
CASC4Q6P4E1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
CASC4Q6P4E1 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.84■□□□□ 0.45
CASC4Q6P4E1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 AC099398.1-201ENST00000567919 2776 ntBASIC17.84■□□□□ 0.45
CASC4Q6P4E1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 RNF126P1-202ENST00000569893 925 ntBASIC17.84■□□□□ 0.45
CASC4Q6P4E1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 HYMAI.1-201ENST00000620949 238 ntBASIC17.84■□□□□ 0.45
CASC4Q6P4E1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CASC4Q6P4E1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.83■□□□□ 0.45
CASC4Q6P4E1 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CASC4Q6P4E1 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CASC4Q6P4E1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CASC4Q6P4E1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.83■□□□□ 0.45
CASC4Q6P4E1 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CASC4Q6P4E1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CASC4Q6P4E1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.83■□□□□ 0.45
CASC4Q6P4E1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CASC4Q6P4E1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CASC4Q6P4E1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
CASC4Q6P4E1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CASC4Q6P4E1 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CASC4Q6P4E1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CASC4Q6P4E1 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CASC4Q6P4E1 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CASC4Q6P4E1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CASC4Q6P4E1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms