Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AC011558.1-201ENST00000623459 338 ntBASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM53Q6P2H8 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 RCN1P1-201ENST00000400413 996 ntBASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 TMPOP1-202ENST00000424642 1267 ntBASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 AC117947.1-201ENST00000427448 529 ntBASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 AL441883.1-201ENST00000566170 1045 ntBASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 RN7SL850P-201ENST00000579959 291 ntBASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM53Q6P2H8 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 TSPY5P-201ENST00000426936 936 ntBASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 HOMER2P1-201ENST00000455653 964 ntBASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 KRT18P21-201ENST00000515767 1272 ntBASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 LINC01238-205ENST00000567549 1107 ntBASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM53Q6P2H8 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 AL162741.1-201ENST00000565563 1558 ntBASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms