Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.23□□□□□ -0.29
MRPL54Q6P161 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.23□□□□□ -0.29
MRPL54Q6P161 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.23□□□□□ -0.29
MRPL54Q6P161 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.23□□□□□ -0.29
MRPL54Q6P161 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.23□□□□□ -0.29
MRPL54Q6P161 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
MRPL54Q6P161 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
MRPL54Q6P161 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.23□□□□□ -0.29
MRPL54Q6P161 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 PTPA-216ENST00000432651 857 ntTSL 2 BASIC13.23□□□□□ -0.29
MRPL54Q6P161 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.23□□□□□ -0.29
MRPL54Q6P161 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.23□□□□□ -0.29
MRPL54Q6P161 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.23□□□□□ -0.29
MRPL54Q6P161 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.23□□□□□ -0.29
MRPL54Q6P161 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.23□□□□□ -0.29
MRPL54Q6P161 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.23□□□□□ -0.29
MRPL54Q6P161 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC13.23□□□□□ -0.29
MRPL54Q6P161 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
MRPL54Q6P161 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.23□□□□□ -0.29
MRPL54Q6P161 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
MRPL54Q6P161 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.23□□□□□ -0.29
MRPL54Q6P161 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
MRPL54Q6P161 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
MRPL54Q6P161 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.23□□□□□ -0.29
MRPL54Q6P161 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.23□□□□□ -0.29
MRPL54Q6P161 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 AP002414.2-201ENST00000591780 3365 ntBASIC13.23□□□□□ -0.29
MRPL54Q6P161 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL54Q6P161 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
MRPL54Q6P161 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.22□□□□□ -0.29
MRPL54Q6P161 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL54Q6P161 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL54Q6P161 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL54Q6P161 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL54Q6P161 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL54Q6P161 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.22□□□□□ -0.29
MRPL54Q6P161 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL54Q6P161 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL54Q6P161 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL54Q6P161 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
MRPL54Q6P161 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
MRPL54Q6P161 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.22□□□□□ -0.29
MRPL54Q6P161 DUTP2-201ENST00000519164 463 ntBASIC13.22□□□□□ -0.29
MRPL54Q6P161 AF201337.1-201ENST00000520239 748 ntBASIC13.22□□□□□ -0.29
MRPL54Q6P161 PNMA6B-201ENST00000538162 1200 ntBASIC13.22□□□□□ -0.29
MRPL54Q6P161 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC13.22□□□□□ -0.29
MRPL54Q6P161 MARS-234ENST00000630571 216 ntTSL 5 BASIC13.22□□□□□ -0.29
MRPL54Q6P161 MARS-235ENST00000630803 183 ntTSL 3 BASIC13.22□□□□□ -0.29
MRPL54Q6P161 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC13.22□□□□□ -0.29
MRPL54Q6P161 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.22□□□□□ -0.29
MRPL54Q6P161 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL54Q6P161 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL54Q6P161 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL54Q6P161 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL54Q6P161 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.22□□□□□ -0.29
MRPL54Q6P161 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
MRPL54Q6P161 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.22□□□□□ -0.29
MRPL54Q6P161 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
MRPL54Q6P161 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
MRPL54Q6P161 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL54Q6P161 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL54Q6P161 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL54Q6P161 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
MRPL54Q6P161 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
MRPL54Q6P161 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
MRPL54Q6P161 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL54Q6P161 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL54Q6P161 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL54Q6P161 GPAT2P1-201ENST00000444924 1672 ntBASIC13.21□□□□□ -0.29
MRPL54Q6P161 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL54Q6P161 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL54Q6P161 AC116353.5-201ENST00000638148 1699 ntBASIC13.21□□□□□ -0.29
MRPL54Q6P161 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms