Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SPCS3P61009 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SPCS3P61009 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SPCS3P61009 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SPCS3P61009 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SPCS3P61009 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SPCS3P61009 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SPCS3P61009 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SPCS3P61009 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SPCS3P61009 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SPCS3P61009 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SPCS3P61009 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SPCS3P61009 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SPCS3P61009 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14.27□□□□□ -0.13
SPCS3P61009 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SPCS3P61009 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.27□□□□□ -0.13
SPCS3P61009 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.26□□□□□ -0.13
SPCS3P61009 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPCS3P61009 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.26□□□□□ -0.13
SPCS3P61009 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPCS3P61009 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SPCS3P61009 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPCS3P61009 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SPCS3P61009 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPCS3P61009 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPCS3P61009 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SPCS3P61009 AC016396.2-201ENST00000562575 1417 ntBASIC14.26□□□□□ -0.13
SPCS3P61009 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPCS3P61009 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.26□□□□□ -0.13
SPCS3P61009 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPCS3P61009 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPCS3P61009 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPCS3P61009 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.26□□□□□ -0.13
SPCS3P61009 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPCS3P61009 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPCS3P61009 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPCS3P61009 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.26□□□□□ -0.13
SPCS3P61009 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.26□□□□□ -0.13
SPCS3P61009 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SPCS3P61009 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.26□□□□□ -0.13
SPCS3P61009 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.26□□□□□ -0.13
SPCS3P61009 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.26□□□□□ -0.13
SPCS3P61009 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.26□□□□□ -0.13
SPCS3P61009 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.26□□□□□ -0.13
SPCS3P61009 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.26□□□□□ -0.13
SPCS3P61009 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.26□□□□□ -0.13
SPCS3P61009 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.26□□□□□ -0.13
SPCS3P61009 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SPCS3P61009 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.26□□□□□ -0.13
SPCS3P61009 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPCS3P61009 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPCS3P61009 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SPCS3P61009 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SPCS3P61009 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SPCS3P61009 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.26□□□□□ -0.13
SPCS3P61009 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPCS3P61009 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPCS3P61009 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.25□□□□□ -0.13
SPCS3P61009 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPCS3P61009 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPCS3P61009 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.25□□□□□ -0.13
SPCS3P61009 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.25□□□□□ -0.13
SPCS3P61009 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.25□□□□□ -0.13
SPCS3P61009 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPCS3P61009 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
SPCS3P61009 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPCS3P61009 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.25□□□□□ -0.13
SPCS3P61009 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPCS3P61009 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SPCS3P61009 AP000523.1-201ENST00000398242 1049 ntBASIC14.25□□□□□ -0.13
SPCS3P61009 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPCS3P61009 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPCS3P61009 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.25□□□□□ -0.13
SPCS3P61009 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPCS3P61009 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.25□□□□□ -0.13
SPCS3P61009 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.25□□□□□ -0.13
SPCS3P61009 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.25□□□□□ -0.13
SPCS3P61009 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.25□□□□□ -0.13
SPCS3P61009 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.25□□□□□ -0.13
SPCS3P61009 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPCS3P61009 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPCS3P61009 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
SPCS3P61009 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SPCS3P61009 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.25□□□□□ -0.13
SPCS3P61009 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPCS3P61009 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPCS3P61009 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
SPCS3P61009 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.25□□□□□ -0.13
SPCS3P61009 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPCS3P61009 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPCS3P61009 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.24□□□□□ -0.13
SPCS3P61009 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPCS3P61009 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPCS3P61009 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPCS3P61009 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SPCS3P61009 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SPCS3P61009 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.24□□□□□ -0.13
SPCS3P61009 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPCS3P61009 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPCS3P61009 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms