Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MCCD1P59942 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.63■□□□□ 0.57
MCCD1P59942 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.63■□□□□ 0.57
MCCD1P59942 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MCCD1P59942 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MCCD1P59942 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MCCD1P59942 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.63■□□□□ 0.57
MCCD1P59942 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.63■□□□□ 0.57
MCCD1P59942 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.63■□□□□ 0.57
MCCD1P59942 PAWRP1-201ENST00000451083 565 ntBASIC18.63■□□□□ 0.57
MCCD1P59942 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MCCD1P59942 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MCCD1P59942 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.63■□□□□ 0.57
MCCD1P59942 TERC-201ENST00000602385 541 ntBASIC18.63■□□□□ 0.57
MCCD1P59942 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.63■□□□□ 0.57
MCCD1P59942 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
MCCD1P59942 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MCCD1P59942 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MCCD1P59942 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MCCD1P59942 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MCCD1P59942 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MCCD1P59942 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
MCCD1P59942 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.63■□□□□ 0.57
MCCD1P59942 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.63■□□□□ 0.57
MCCD1P59942 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.63■□□□□ 0.57
MCCD1P59942 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MCCD1P59942 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.63■□□□□ 0.57
MCCD1P59942 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.63■□□□□ 0.57
MCCD1P59942 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MCCD1P59942 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MCCD1P59942 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MCCD1P59942 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MCCD1P59942 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MCCD1P59942 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MCCD1P59942 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
MCCD1P59942 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.62■□□□□ 0.57
MCCD1P59942 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MCCD1P59942 AC073621.1-201ENST00000392730 636 ntBASIC18.62■□□□□ 0.57
MCCD1P59942 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MCCD1P59942 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MCCD1P59942 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.62■□□□□ 0.57
MCCD1P59942 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.62■□□□□ 0.57
MCCD1P59942 EMBP1-201ENST00000458200 901 ntBASIC18.62■□□□□ 0.57
MCCD1P59942 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.62■□□□□ 0.57
MCCD1P59942 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.62■□□□□ 0.57
MCCD1P59942 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.62■□□□□ 0.57
MCCD1P59942 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.62■□□□□ 0.57
MCCD1P59942 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.62■□□□□ 0.57
MCCD1P59942 AC139887.3-201ENST00000568585 713 ntBASIC18.62■□□□□ 0.57
MCCD1P59942 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.62■□□□□ 0.57
MCCD1P59942 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.62■□□□□ 0.57
MCCD1P59942 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.62■□□□□ 0.57
MCCD1P59942 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MCCD1P59942 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
MCCD1P59942 AC107918.4-202ENST00000641623 219 ntBASIC18.62■□□□□ 0.57
MCCD1P59942 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MCCD1P59942 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.62■□□□□ 0.57
MCCD1P59942 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MCCD1P59942 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.62■□□□□ 0.57
MCCD1P59942 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.62■□□□□ 0.57
MCCD1P59942 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MCCD1P59942 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
MCCD1P59942 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MCCD1P59942 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MCCD1P59942 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MCCD1P59942 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
MCCD1P59942 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MCCD1P59942 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.61■□□□□ 0.57
MCCD1P59942 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MCCD1P59942 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.61■□□□□ 0.57
MCCD1P59942 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
MCCD1P59942 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.61■□□□□ 0.57
MCCD1P59942 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.61■□□□□ 0.57
MCCD1P59942 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MCCD1P59942 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.61■□□□□ 0.57
MCCD1P59942 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MCCD1P59942 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.61■□□□□ 0.57
MCCD1P59942 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MCCD1P59942 AC018712.1-201ENST00000455767 687 ntBASIC18.61■□□□□ 0.57
MCCD1P59942 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.61■□□□□ 0.57
MCCD1P59942 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.61■□□□□ 0.57
MCCD1P59942 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.61■□□□□ 0.57
MCCD1P59942 LINC01711-201ENST00000598340 967 ntBASIC18.61■□□□□ 0.57
MCCD1P59942 AL121912.1-201ENST00000603683 238 ntBASIC18.61■□□□□ 0.57
MCCD1P59942 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
MCCD1P59942 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MCCD1P59942 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
MCCD1P59942 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MCCD1P59942 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.61■□□□□ 0.57
MCCD1P59942 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MCCD1P59942 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MCCD1P59942 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MCCD1P59942 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
MCCD1P59942 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MCCD1P59942 AC022211.2-201ENST00000585075 2527 ntBASIC18.6■□□□□ 0.57
MCCD1P59942 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
MCCD1P59942 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MCCD1P59942 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MCCD1P59942 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MCCD1P59942 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms