Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN2P57739 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLDN2P57739 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN2P57739 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN2P57739 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.22■□□□□ 0.35
CLDN2P57739 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN2P57739 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN2P57739 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.22■□□□□ 0.35
CLDN2P57739 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN2P57739 AC018845.2-201ENST00000568326 409 ntBASIC17.22■□□□□ 0.35
CLDN2P57739 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLDN2P57739 AC002347.1-201ENST00000569543 541 ntBASIC17.22■□□□□ 0.35
CLDN2P57739 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN2P57739 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.22■□□□□ 0.35
CLDN2P57739 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.22■□□□□ 0.35
CLDN2P57739 AL353135.1-201ENST00000606729 504 ntBASIC17.22■□□□□ 0.35
CLDN2P57739 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.22■□□□□ 0.35
CLDN2P57739 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.22■□□□□ 0.35
CLDN2P57739 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN2P57739 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CLDN2P57739 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CLDN2P57739 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN2P57739 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CLDN2P57739 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN2P57739 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN2P57739 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN2P57739 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN2P57739 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CLDN2P57739 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN2P57739 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN2P57739 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN2P57739 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CLDN2P57739 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CLDN2P57739 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN2P57739 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CLDN2P57739 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN2P57739 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN2P57739 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CLDN2P57739 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CLDN2P57739 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN2P57739 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN2P57739 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN2P57739 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN2P57739 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN2P57739 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN2P57739 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
CLDN2P57739 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN2P57739 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLDN2P57739 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CLDN2P57739 VN2R19P-201ENST00000442399 1052 ntBASIC17.21■□□□□ 0.35
CLDN2P57739 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.21■□□□□ 0.35
CLDN2P57739 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.21■□□□□ 0.35
CLDN2P57739 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN2P57739 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.21■□□□□ 0.35
CLDN2P57739 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CLDN2P57739 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN2P57739 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN2P57739 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN2P57739 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CLDN2P57739 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN2P57739 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN2P57739 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CLDN2P57739 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN2P57739 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CLDN2P57739 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CLDN2P57739 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CLDN2P57739 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN2P57739 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN2P57739 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN2P57739 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN2P57739 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN2P57739 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN2P57739 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN2P57739 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN2P57739 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.2■□□□□ 0.34
CLDN2P57739 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN2P57739 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN2P57739 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN2P57739 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.2■□□□□ 0.34
CLDN2P57739 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN2P57739 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CLDN2P57739 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN2P57739 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN2P57739 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN2P57739 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.2■□□□□ 0.34
CLDN2P57739 AC004832.2-201ENST00000426397 482 ntBASIC17.2■□□□□ 0.34
CLDN2P57739 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN2P57739 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.2■□□□□ 0.34
CLDN2P57739 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN2P57739 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN2P57739 MIR3687-2-201ENST00000577708 61 ntBASIC17.2■□□□□ 0.34
CLDN2P57739 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
CLDN2P57739 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.2■□□□□ 0.34
CLDN2P57739 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.2■□□□□ 0.34
CLDN2P57739 MIR3687-1-201ENST00000614492 61 ntBASIC17.2■□□□□ 0.34
CLDN2P57739 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CLDN2P57739 AL805961.1-202ENST00000641562 540 ntBASIC17.2■□□□□ 0.34
CLDN2P57739 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.2■□□□□ 0.34
CLDN2P57739 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLDN2P57739 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms