Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
CMC4P56277 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.02□□□□□ -0.32
CMC4P56277 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CMC4P56277 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CMC4P56277 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC13.02□□□□□ -0.32
CMC4P56277 NOC2LP2-201ENST00000407594 1944 ntBASIC13.02□□□□□ -0.32
CMC4P56277 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
CMC4P56277 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CMC4P56277 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CMC4P56277 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CMC4P56277 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CMC4P56277 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CMC4P56277 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CMC4P56277 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CMC4P56277 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.02□□□□□ -0.33
CMC4P56277 AF186996.4-201ENST00000467186 377 ntBASIC13.02□□□□□ -0.33
CMC4P56277 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.02□□□□□ -0.33
CMC4P56277 RN7SL510P-201ENST00000581311 263 ntBASIC13.02□□□□□ -0.33
CMC4P56277 AL121912.1-201ENST00000603683 238 ntBASIC13.02□□□□□ -0.33
CMC4P56277 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CMC4P56277 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.02□□□□□ -0.33
CMC4P56277 AC073592.4-201ENST00000623827 446 ntBASIC13.02□□□□□ -0.33
CMC4P56277 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CMC4P56277 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CMC4P56277 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CMC4P56277 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CMC4P56277 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.02□□□□□ -0.33
CMC4P56277 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CMC4P56277 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.02□□□□□ -0.33
CMC4P56277 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.02□□□□□ -0.33
CMC4P56277 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CMC4P56277 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CMC4P56277 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
CMC4P56277 AC009336.1-201ENST00000608941 1553 ntBASIC13.02□□□□□ -0.33
CMC4P56277 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
CMC4P56277 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
CMC4P56277 LINC00304-203ENST00000565008 1864 ntBASIC13.02□□□□□ -0.33
CMC4P56277 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CMC4P56277 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMC4P56277 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CMC4P56277 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMC4P56277 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMC4P56277 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMC4P56277 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMC4P56277 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMC4P56277 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
CMC4P56277 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CMC4P56277 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMC4P56277 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMC4P56277 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.01□□□□□ -0.33
CMC4P56277 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.01□□□□□ -0.33
CMC4P56277 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CMC4P56277 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CMC4P56277 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CMC4P56277 SPDYE21P-201ENST00000413323 827 ntBASIC13.01□□□□□ -0.33
CMC4P56277 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CMC4P56277 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.01□□□□□ -0.33
CMC4P56277 AL662844.1-201ENST00000546340 181 ntBASIC13.01□□□□□ -0.33
CMC4P56277 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMC4P56277 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CMC4P56277 AC012313.10-201ENST00000623509 926 ntBASIC13.01□□□□□ -0.33
CMC4P56277 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.01□□□□□ -0.33
CMC4P56277 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CMC4P56277 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.01□□□□□ -0.33
CMC4P56277 AL138688.1-201ENST00000624851 1594 ntBASIC13.01□□□□□ -0.33
CMC4P56277 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CMC4P56277 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CMC4P56277 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CMC4P56277 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CMC4P56277 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.01□□□□□ -0.33
CMC4P56277 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMC4P56277 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CMC4P56277 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CMC4P56277 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.01□□□□□ -0.33
CMC4P56277 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CMC4P56277 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.01□□□□□ -0.33
CMC4P56277 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMC4P56277 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMC4P56277 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMC4P56277 FLJ16779-201ENST00000612722 7638 ntBASIC13□□□□□ -0.33
CMC4P56277 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CMC4P56277 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CMC4P56277 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
CMC4P56277 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CMC4P56277 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC13□□□□□ -0.33
CMC4P56277 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC13□□□□□ -0.33
CMC4P56277 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13□□□□□ -0.33
CMC4P56277 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13□□□□□ -0.33
CMC4P56277 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CMC4P56277 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CMC4P56277 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13□□□□□ -0.33
CMC4P56277 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CMC4P56277 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CMC4P56277 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
CMC4P56277 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13□□□□□ -0.33
CMC4P56277 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13□□□□□ -0.33
CMC4P56277 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13□□□□□ -0.33
CMC4P56277 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
CMC4P56277 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13□□□□□ -0.33
CMC4P56277 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms