Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.62■□□□□ 0.25
NR1H2P55055 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NR1H2P55055 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
NR1H2P55055 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
NR1H2P55055 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.62■□□□□ 0.25
NR1H2P55055 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.62■□□□□ 0.25
NR1H2P55055 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NR1H2P55055 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.62■□□□□ 0.25
NR1H2P55055 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.62■□□□□ 0.25
NR1H2P55055 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H2P55055 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.61■□□□□ 0.25
NR1H2P55055 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H2P55055 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NR1H2P55055 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H2P55055 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H2P55055 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H2P55055 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H2P55055 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H2P55055 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
NR1H2P55055 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H2P55055 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H2P55055 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.61■□□□□ 0.25
NR1H2P55055 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H2P55055 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NR1H2P55055 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H2P55055 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H2P55055 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H2P55055 AC007950.2-201ENST00000615045 2347 ntBASIC16.61■□□□□ 0.25
NR1H2P55055 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H2P55055 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.61■□□□□ 0.25
NR1H2P55055 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NR1H2P55055 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H2P55055 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H2P55055 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
NR1H2P55055 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H2P55055 RNF152P1-201ENST00000397754 604 ntBASIC16.61■□□□□ 0.25
NR1H2P55055 COX11P1-201ENST00000489116 835 ntBASIC16.61■□□□□ 0.25
NR1H2P55055 AC063952.2-201ENST00000498792 1227 ntBASIC16.61■□□□□ 0.25
NR1H2P55055 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H2P55055 AC022616.7-201ENST00000525383 220 ntBASIC16.61■□□□□ 0.25
NR1H2P55055 WWOX-216ENST00000569818 525 ntBASIC16.61■□□□□ 0.25
NR1H2P55055 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H2P55055 AL138966.2-201ENST00000621997 464 ntBASIC16.61■□□□□ 0.25
NR1H2P55055 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
NR1H2P55055 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.61■□□□□ 0.25
NR1H2P55055 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.61■□□□□ 0.25
NR1H2P55055 AC005052.1-201ENST00000625181 2492 ntBASIC16.61■□□□□ 0.25
NR1H2P55055 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
NR1H2P55055 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H2P55055 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H2P55055 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.61■□□□□ 0.25
NR1H2P55055 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR1H2P55055 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NR1H2P55055 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.61■□□□□ 0.25
NR1H2P55055 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.6■□□□□ 0.25
NR1H2P55055 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H2P55055 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H2P55055 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.6■□□□□ 0.25
NR1H2P55055 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NR1H2P55055 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.6■□□□□ 0.25
NR1H2P55055 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.6■□□□□ 0.25
NR1H2P55055 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H2P55055 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NR1H2P55055 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H2P55055 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H2P55055 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.6■□□□□ 0.25
NR1H2P55055 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H2P55055 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H2P55055 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.6■□□□□ 0.25
NR1H2P55055 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.6■□□□□ 0.25
NR1H2P55055 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H2P55055 AC092647.4-201ENST00000457211 535 ntBASIC16.6■□□□□ 0.25
NR1H2P55055 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H2P55055 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.6■□□□□ 0.25
NR1H2P55055 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NR1H2P55055 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H2P55055 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H2P55055 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NR1H2P55055 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H2P55055 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
NR1H2P55055 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H2P55055 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H2P55055 KRT8P41-201ENST00000533985 1514 ntBASIC16.6■□□□□ 0.25
NR1H2P55055 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.59■□□□□ 0.25
NR1H2P55055 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H2P55055 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H2P55055 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms