Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.12■□□□□ 0.65
ACLYP53396 AL512356.2-201ENST00000546955 174 ntBASIC19.12■□□□□ 0.65
ACLYP53396 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ACLYP53396 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ACLYP53396 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
ACLYP53396 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ACLYP53396 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ACLYP53396 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.11■□□□□ 0.65
ACLYP53396 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.11■□□□□ 0.65
ACLYP53396 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ACLYP53396 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
ACLYP53396 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ACLYP53396 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
ACLYP53396 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.11■□□□□ 0.65
ACLYP53396 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.11■□□□□ 0.65
ACLYP53396 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.11■□□□□ 0.65
ACLYP53396 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
ACLYP53396 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ACLYP53396 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ACLYP53396 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
ACLYP53396 TFAMP1-201ENST00000412727 736 ntBASIC19.11■□□□□ 0.65
ACLYP53396 AC015922.1-201ENST00000421102 1152 ntBASIC19.11■□□□□ 0.65
ACLYP53396 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ACLYP53396 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ACLYP53396 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.11■□□□□ 0.65
ACLYP53396 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.11■□□□□ 0.65
ACLYP53396 AC243562.1-201ENST00000560672 389 ntBASIC19.11■□□□□ 0.65
ACLYP53396 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ACLYP53396 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ACLYP53396 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ACLYP53396 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.11■□□□□ 0.65
ACLYP53396 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ACLYP53396 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
ACLYP53396 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.11■□□□□ 0.65
ACLYP53396 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ACLYP53396 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.11■□□□□ 0.65
ACLYP53396 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ACLYP53396 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
ACLYP53396 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ACLYP53396 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
ACLYP53396 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ACLYP53396 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ACLYP53396 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ACLYP53396 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.1■□□□□ 0.65
ACLYP53396 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
ACLYP53396 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
ACLYP53396 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.1■□□□□ 0.65
ACLYP53396 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ACLYP53396 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ACLYP53396 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ACLYP53396 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ACLYP53396 BASP1P1-201ENST00000430708 665 ntBASIC19.1■□□□□ 0.65
ACLYP53396 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ACLYP53396 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.1■□□□□ 0.65
ACLYP53396 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ACLYP53396 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.1■□□□□ 0.65
ACLYP53396 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.1■□□□□ 0.65
ACLYP53396 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ACLYP53396 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ACLYP53396 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.1■□□□□ 0.65
ACLYP53396 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ACLYP53396 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.1■□□□□ 0.65
ACLYP53396 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ACLYP53396 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ACLYP53396 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.1■□□□□ 0.65
ACLYP53396 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ACLYP53396 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ACLYP53396 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
ACLYP53396 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.1■□□□□ 0.65
ACLYP53396 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ACLYP53396 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ACLYP53396 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ACLYP53396 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ACLYP53396 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ACLYP53396 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ACLYP53396 TUBB3P1-201ENST00000405796 1332 ntBASIC19.09■□□□□ 0.65
ACLYP53396 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
ACLYP53396 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
ACLYP53396 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.09■□□□□ 0.65
ACLYP53396 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ACLYP53396 MIR943-201ENST00000401286 94 ntBASIC19.09■□□□□ 0.65
ACLYP53396 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.09■□□□□ 0.65
ACLYP53396 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.09■□□□□ 0.65
ACLYP53396 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.09■□□□□ 0.65
ACLYP53396 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.09■□□□□ 0.65
ACLYP53396 AC107918.2-201ENST00000530817 355 ntBASIC19.09■□□□□ 0.65
ACLYP53396 AP001059.3-201ENST00000619053 235 ntBASIC19.09■□□□□ 0.65
ACLYP53396 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ACLYP53396 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ACLYP53396 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ACLYP53396 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ACLYP53396 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ACLYP53396 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ACLYP53396 KRT18P55-202ENST00000578578 1546 ntBASIC19.09■□□□□ 0.65
ACLYP53396 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ACLYP53396 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
ACLYP53396 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ACLYP53396 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.09■□□□□ 0.65
ACLYP53396 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ACLYP53396 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms