Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
HMGA2P52926 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA2P52926 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA2P52926 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA2P52926 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGA2P52926 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA2P52926 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
HMGA2P52926 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.94■□□□□ 0.14
HMGA2P52926 AC092597.1-201ENST00000487352 616 ntBASIC15.94■□□□□ 0.14
HMGA2P52926 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGA2P52926 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA2P52926 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGA2P52926 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.94■□□□□ 0.14
HMGA2P52926 AC145285.6-201ENST00000604632 637 ntBASIC15.94■□□□□ 0.14
HMGA2P52926 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGA2P52926 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA2P52926 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA2P52926 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA2P52926 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGA2P52926 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGA2P52926 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA2P52926 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
HMGA2P52926 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA2P52926 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA2P52926 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
HMGA2P52926 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGA2P52926 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGA2P52926 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA2P52926 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA2P52926 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA2P52926 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA2P52926 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA2P52926 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA2P52926 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA2P52926 AC006449.5-201ENST00000610658 2098 ntBASIC15.93■□□□□ 0.14
HMGA2P52926 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA2P52926 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA2P52926 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
HMGA2P52926 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA2P52926 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA2P52926 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA2P52926 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.93■□□□□ 0.14
HMGA2P52926 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
HMGA2P52926 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA2P52926 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.93■□□□□ 0.14
HMGA2P52926 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.93■□□□□ 0.14
HMGA2P52926 AC109462.3-201ENST00000573934 613 ntBASIC15.93■□□□□ 0.14
HMGA2P52926 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGA2P52926 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.93■□□□□ 0.14
HMGA2P52926 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.93■□□□□ 0.14
HMGA2P52926 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
HMGA2P52926 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA2P52926 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA2P52926 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGA2P52926 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA2P52926 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA2P52926 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
HMGA2P52926 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA2P52926 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HMGA2P52926 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGA2P52926 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA2P52926 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA2P52926 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA2P52926 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA2P52926 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA2P52926 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA2P52926 EGFEM1P-202ENST00000431685 1563 ntBASIC15.92■□□□□ 0.14
HMGA2P52926 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
HMGA2P52926 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
HMGA2P52926 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGA2P52926 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGA2P52926 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA2P52926 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA2P52926 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGA2P52926 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA2P52926 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.92■□□□□ 0.14
HMGA2P52926 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA2P52926 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA2P52926 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
HMGA2P52926 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.92■□□□□ 0.14
HMGA2P52926 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA2P52926 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.92■□□□□ 0.14
HMGA2P52926 AC007967.3-201ENST00000434308 558 ntBASIC15.92■□□□□ 0.14
HMGA2P52926 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGA2P52926 AC122714.2-201ENST00000502787 707 ntBASIC15.92■□□□□ 0.14
HMGA2P52926 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
HMGA2P52926 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGA2P52926 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
HMGA2P52926 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA2P52926 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA2P52926 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
HMGA2P52926 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA2P52926 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HMGA2P52926 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGA2P52926 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA2P52926 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA2P52926 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA2P52926 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA2P52926 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA2P52926 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms