Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNCAP37840 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SNCAP37840 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.42□□□□□ -0.1
SNCAP37840 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
SNCAP37840 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.42□□□□□ -0.1
SNCAP37840 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
SNCAP37840 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.42□□□□□ -0.1
SNCAP37840 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SNCAP37840 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.42□□□□□ -0.1
SNCAP37840 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SNCAP37840 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.42□□□□□ -0.1
SNCAP37840 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SNCAP37840 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.42□□□□□ -0.1
SNCAP37840 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 AC104390.1-201ENST00000555663 520 ntBASIC14.42□□□□□ -0.1
SNCAP37840 AC008687.5-201ENST00000593746 558 ntBASIC14.42□□□□□ -0.1
SNCAP37840 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.42□□□□□ -0.1
SNCAP37840 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.42□□□□□ -0.1
SNCAP37840 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.42□□□□□ -0.1
SNCAP37840 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
SNCAP37840 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SNCAP37840 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 AC026691.1-201ENST00000602502 2017 ntBASIC14.42□□□□□ -0.1
SNCAP37840 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SNCAP37840 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.42□□□□□ -0.1
SNCAP37840 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.42□□□□□ -0.1
SNCAP37840 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNCAP37840 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.41□□□□□ -0.1
SNCAP37840 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SNCAP37840 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.41□□□□□ -0.1
SNCAP37840 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
SNCAP37840 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SNCAP37840 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.41□□□□□ -0.1
SNCAP37840 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SNCAP37840 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SNCAP37840 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.41□□□□□ -0.1
SNCAP37840 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 AC098590.1-201ENST00000468126 897 ntBASIC14.41□□□□□ -0.1
SNCAP37840 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.41□□□□□ -0.1
SNCAP37840 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SNCAP37840 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.41□□□□□ -0.1
SNCAP37840 MIR4785-201ENST00000585005 73 ntBASIC14.41□□□□□ -0.1
SNCAP37840 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SNCAP37840 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SNCAP37840 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SNCAP37840 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SNCAP37840 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms