Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.28■□□□□ 0.2
GABRA3P34903 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.28■□□□□ 0.2
GABRA3P34903 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GABRA3P34903 AL049757.1-201ENST00000616842 1596 ntBASIC16.28■□□□□ 0.2
GABRA3P34903 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GABRA3P34903 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABRA3P34903 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
GABRA3P34903 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.28■□□□□ 0.2
GABRA3P34903 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABRA3P34903 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GABRA3P34903 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.28■□□□□ 0.2
GABRA3P34903 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABRA3P34903 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
GABRA3P34903 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABRA3P34903 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GABRA3P34903 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABRA3P34903 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GABRA3P34903 AC108860.2-201ENST00000562760 2183 ntBASIC16.27■□□□□ 0.2
GABRA3P34903 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GABRA3P34903 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABRA3P34903 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABRA3P34903 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.27■□□□□ 0.2
GABRA3P34903 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.27■□□□□ 0.2
GABRA3P34903 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.27■□□□□ 0.2
GABRA3P34903 POM121L3P-201ENST00000419331 1163 ntBASIC16.27■□□□□ 0.2
GABRA3P34903 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.27■□□□□ 0.2
GABRA3P34903 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.27■□□□□ 0.2
GABRA3P34903 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GABRA3P34903 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.27■□□□□ 0.2
GABRA3P34903 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.27■□□□□ 0.2
GABRA3P34903 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GABRA3P34903 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABRA3P34903 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GABRA3P34903 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GABRA3P34903 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
GABRA3P34903 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GABRA3P34903 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.27■□□□□ 0.19
GABRA3P34903 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.27■□□□□ 0.19
GABRA3P34903 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
GABRA3P34903 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.27■□□□□ 0.19
GABRA3P34903 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
GABRA3P34903 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
GABRA3P34903 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
GABRA3P34903 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.26■□□□□ 0.19
GABRA3P34903 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
GABRA3P34903 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.26■□□□□ 0.19
GABRA3P34903 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.26■□□□□ 0.19
GABRA3P34903 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABRA3P34903 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABRA3P34903 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.26■□□□□ 0.19
GABRA3P34903 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABRA3P34903 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.26■□□□□ 0.19
GABRA3P34903 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
GABRA3P34903 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABRA3P34903 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABRA3P34903 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GABRA3P34903 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABRA3P34903 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.26■□□□□ 0.19
GABRA3P34903 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GABRA3P34903 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
GABRA3P34903 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABRA3P34903 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABRA3P34903 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.26■□□□□ 0.19
GABRA3P34903 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
GABRA3P34903 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GABRA3P34903 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABRA3P34903 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GABRA3P34903 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.26■□□□□ 0.19
GABRA3P34903 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.26■□□□□ 0.19
GABRA3P34903 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.26■□□□□ 0.19
GABRA3P34903 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABRA3P34903 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABRA3P34903 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GABRA3P34903 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABRA3P34903 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABRA3P34903 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABRA3P34903 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.25■□□□□ 0.19
GABRA3P34903 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
GABRA3P34903 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.25■□□□□ 0.19
GABRA3P34903 INTS4P1-201ENST00000438455 1935 ntBASIC16.25■□□□□ 0.19
GABRA3P34903 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABRA3P34903 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.25■□□□□ 0.19
GABRA3P34903 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABRA3P34903 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GABRA3P34903 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABRA3P34903 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABRA3P34903 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
GABRA3P34903 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
GABRA3P34903 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GABRA3P34903 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GABRA3P34903 HCG4P8-203ENST00000443049 980 ntBASIC16.25■□□□□ 0.19
GABRA3P34903 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GABRA3P34903 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.25■□□□□ 0.19
GABRA3P34903 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.25■□□□□ 0.19
GABRA3P34903 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
GABRA3P34903 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
GABRA3P34903 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.25■□□□□ 0.19
GABRA3P34903 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.25■□□□□ 0.19
GABRA3P34903 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.25■□□□□ 0.19
GABRA3P34903 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms