Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC12.9□□□□□ -0.34
CKS2P33552 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CKS2P33552 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CKS2P33552 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC12.9□□□□□ -0.34
CKS2P33552 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CKS2P33552 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC12.9□□□□□ -0.34
CKS2P33552 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC12.9□□□□□ -0.34
CKS2P33552 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CKS2P33552 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CKS2P33552 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC12.9□□□□□ -0.34
CKS2P33552 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
CKS2P33552 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.9□□□□□ -0.34
CKS2P33552 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CKS2P33552 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.9□□□□□ -0.34
CKS2P33552 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CKS2P33552 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CKS2P33552 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
CKS2P33552 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
CKS2P33552 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC12.9□□□□□ -0.35
CKS2P33552 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
CKS2P33552 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CKS2P33552 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CKS2P33552 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS2P33552 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC12.89□□□□□ -0.35
CKS2P33552 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS2P33552 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
CKS2P33552 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.89□□□□□ -0.35
CKS2P33552 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS2P33552 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS2P33552 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS2P33552 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS2P33552 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CKS2P33552 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CKS2P33552 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CKS2P33552 KRT18P23-201ENST00000435622 1283 ntBASIC12.89□□□□□ -0.35
CKS2P33552 KSR1P1-201ENST00000446298 240 ntBASIC12.89□□□□□ -0.35
CKS2P33552 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CKS2P33552 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC12.89□□□□□ -0.35
CKS2P33552 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC12.89□□□□□ -0.35
CKS2P33552 MTDHP1-201ENST00000605323 784 ntBASIC12.89□□□□□ -0.35
CKS2P33552 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC12.89□□□□□ -0.35
CKS2P33552 AL031985.4-201ENST00000642138 673 ntBASIC12.89□□□□□ -0.35
CKS2P33552 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CKS2P33552 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CKS2P33552 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS2P33552 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC12.89□□□□□ -0.35
CKS2P33552 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS2P33552 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS2P33552 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CKS2P33552 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS2P33552 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS2P33552 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CKS2P33552 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC12.89□□□□□ -0.35
CKS2P33552 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS2P33552 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC12.89□□□□□ -0.35
CKS2P33552 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CKS2P33552 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 KRT8P7-201ENST00000533003 1432 ntBASIC12.88□□□□□ -0.35
CKS2P33552 HOXB1-202ENST00000577092 1414 ntBASIC12.88□□□□□ -0.35
CKS2P33552 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC12.88□□□□□ -0.35
CKS2P33552 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC12.88□□□□□ -0.35
CKS2P33552 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.88□□□□□ -0.35
CKS2P33552 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.88□□□□□ -0.35
CKS2P33552 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CKS2P33552 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 AC026691.1-201ENST00000602502 2017 ntBASIC12.88□□□□□ -0.35
CKS2P33552 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC12.88□□□□□ -0.35
CKS2P33552 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC12.88□□□□□ -0.35
CKS2P33552 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC12.88□□□□□ -0.35
CKS2P33552 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CKS2P33552 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC12.88□□□□□ -0.35
CKS2P33552 KRASP1-201ENST00000407852 552 ntBASIC12.88□□□□□ -0.35
CKS2P33552 AC239809.2-201ENST00000415381 517 ntBASIC12.88□□□□□ -0.35
CKS2P33552 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC12.88□□□□□ -0.35
CKS2P33552 KRT17P3-201ENST00000420566 1262 ntBASIC12.88□□□□□ -0.35
CKS2P33552 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
CKS2P33552 AC022517.1-201ENST00000592429 346 ntBASIC12.88□□□□□ -0.35
CKS2P33552 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC12.88□□□□□ -0.35
CKS2P33552 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
CKS2P33552 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC12.88□□□□□ -0.35
CKS2P33552 AC132938.6-201ENST00000623828 1655 ntBASIC12.88□□□□□ -0.35
CKS2P33552 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CKS2P33552 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms