Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNGA1P29973 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CNGA1P29973 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNGA1P29973 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.84■□□□□ 0.77
CNGA1P29973 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNGA1P29973 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CNGA1P29973 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNGA1P29973 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.83■□□□□ 0.77
CNGA1P29973 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CNGA1P29973 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.83■□□□□ 0.77
CNGA1P29973 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNGA1P29973 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNGA1P29973 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNGA1P29973 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.83■□□□□ 0.77
CNGA1P29973 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CNGA1P29973 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CNGA1P29973 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.83■□□□□ 0.77
CNGA1P29973 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.83■□□□□ 0.77
CNGA1P29973 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CNGA1P29973 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.83■□□□□ 0.77
CNGA1P29973 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.83■□□□□ 0.77
CNGA1P29973 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.83■□□□□ 0.77
CNGA1P29973 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.83■□□□□ 0.76
CNGA1P29973 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNGA1P29973 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CNGA1P29973 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNGA1P29973 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNGA1P29973 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNGA1P29973 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNGA1P29973 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.83■□□□□ 0.76
CNGA1P29973 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CNGA1P29973 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CNGA1P29973 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.83■□□□□ 0.76
CNGA1P29973 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNGA1P29973 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNGA1P29973 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.83■□□□□ 0.76
CNGA1P29973 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNGA1P29973 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNGA1P29973 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.82■□□□□ 0.76
CNGA1P29973 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNGA1P29973 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.82■□□□□ 0.76
CNGA1P29973 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNGA1P29973 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CNGA1P29973 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNGA1P29973 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNGA1P29973 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNGA1P29973 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNGA1P29973 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.82■□□□□ 0.76
CNGA1P29973 MRPL20P1-201ENST00000400819 433 ntBASIC19.82■□□□□ 0.76
CNGA1P29973 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.82■□□□□ 0.76
CNGA1P29973 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.82■□□□□ 0.76
CNGA1P29973 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNGA1P29973 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.82■□□□□ 0.76
CNGA1P29973 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.82■□□□□ 0.76
CNGA1P29973 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.82■□□□□ 0.76
CNGA1P29973 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.82■□□□□ 0.76
CNGA1P29973 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.82■□□□□ 0.76
CNGA1P29973 AC093028.1-201ENST00000622998 982 ntBASIC19.82■□□□□ 0.76
CNGA1P29973 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.82■□□□□ 0.76
CNGA1P29973 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CNGA1P29973 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CNGA1P29973 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNGA1P29973 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.82■□□□□ 0.76
CNGA1P29973 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNGA1P29973 AL049757.1-201ENST00000616842 1596 ntBASIC19.82■□□□□ 0.76
CNGA1P29973 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CNGA1P29973 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.81■□□□□ 0.76
CNGA1P29973 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNGA1P29973 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNGA1P29973 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNGA1P29973 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.81■□□□□ 0.76
CNGA1P29973 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CNGA1P29973 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNGA1P29973 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNGA1P29973 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNGA1P29973 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CNGA1P29973 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.81■□□□□ 0.76
CNGA1P29973 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CNGA1P29973 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.81■□□□□ 0.76
CNGA1P29973 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.81■□□□□ 0.76
CNGA1P29973 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
CNGA1P29973 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.81■□□□□ 0.76
CNGA1P29973 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.81■□□□□ 0.76
CNGA1P29973 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.81■□□□□ 0.76
CNGA1P29973 AC027612.4-201ENST00000605371 583 ntBASIC19.81■□□□□ 0.76
CNGA1P29973 AC010654.1-201ENST00000615722 808 ntBASIC19.81■□□□□ 0.76
CNGA1P29973 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.81■□□□□ 0.76
CNGA1P29973 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNGA1P29973 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
CNGA1P29973 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CNGA1P29973 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CNGA1P29973 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CNGA1P29973 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNGA1P29973 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNGA1P29973 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.81■□□□□ 0.76
CNGA1P29973 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNGA1P29973 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNGA1P29973 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNGA1P29973 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNGA1P29973 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms