Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.03■□□□□ 0.32
EPHA3P29320 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.03■□□□□ 0.32
EPHA3P29320 GCSHP2-201ENST00000560971 527 ntBASIC17.03■□□□□ 0.32
EPHA3P29320 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.03■□□□□ 0.32
EPHA3P29320 AL139327.4-201ENST00000612362 153 ntBASIC17.03■□□□□ 0.32
EPHA3P29320 AC004263.2-201ENST00000617183 678 ntBASIC17.03■□□□□ 0.32
EPHA3P29320 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EPHA3P29320 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EPHA3P29320 RNF216P1-203ENST00000404404 2427 ntBASIC17.03■□□□□ 0.32
EPHA3P29320 LINC02012-201ENST00000608206 1725 ntBASIC17.03■□□□□ 0.32
EPHA3P29320 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHA3P29320 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EPHA3P29320 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.03■□□□□ 0.32
EPHA3P29320 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
EPHA3P29320 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
EPHA3P29320 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
EPHA3P29320 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHA3P29320 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHA3P29320 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
EPHA3P29320 AC008741.2-201ENST00000612792 3115 ntBASIC17.03■□□□□ 0.32
EPHA3P29320 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
EPHA3P29320 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
EPHA3P29320 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHA3P29320 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.03■□□□□ 0.32
EPHA3P29320 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
EPHA3P29320 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EPHA3P29320 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
EPHA3P29320 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
EPHA3P29320 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EPHA3P29320 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.02■□□□□ 0.32
EPHA3P29320 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
EPHA3P29320 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.02■□□□□ 0.32
EPHA3P29320 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EPHA3P29320 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
EPHA3P29320 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EPHA3P29320 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EPHA3P29320 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
EPHA3P29320 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EPHA3P29320 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EPHA3P29320 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
EPHA3P29320 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.02■□□□□ 0.32
EPHA3P29320 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.02■□□□□ 0.32
EPHA3P29320 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.02■□□□□ 0.32
EPHA3P29320 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.02■□□□□ 0.32
EPHA3P29320 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.02■□□□□ 0.32
EPHA3P29320 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.02■□□□□ 0.32
EPHA3P29320 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.02■□□□□ 0.32
EPHA3P29320 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.02■□□□□ 0.32
EPHA3P29320 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.02■□□□□ 0.32
EPHA3P29320 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.02■□□□□ 0.32
EPHA3P29320 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
EPHA3P29320 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.02■□□□□ 0.32
EPHA3P29320 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
EPHA3P29320 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.02■□□□□ 0.31
EPHA3P29320 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
EPHA3P29320 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
EPHA3P29320 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
EPHA3P29320 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
EPHA3P29320 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
EPHA3P29320 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.02■□□□□ 0.31
EPHA3P29320 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
EPHA3P29320 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.01■□□□□ 0.31
EPHA3P29320 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.01■□□□□ 0.31
EPHA3P29320 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EPHA3P29320 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EPHA3P29320 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.01■□□□□ 0.31
EPHA3P29320 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EPHA3P29320 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
EPHA3P29320 KRT17P2-201ENST00000300992 1314 ntBASIC17.01■□□□□ 0.31
EPHA3P29320 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.01■□□□□ 0.31
EPHA3P29320 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
EPHA3P29320 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.01■□□□□ 0.31
EPHA3P29320 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EPHA3P29320 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
EPHA3P29320 AC092171.3-201ENST00000610122 2651 ntBASIC17.01■□□□□ 0.31
EPHA3P29320 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
EPHA3P29320 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EPHA3P29320 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
EPHA3P29320 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EPHA3P29320 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
EPHA3P29320 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
EPHA3P29320 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
EPHA3P29320 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
EPHA3P29320 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.01■□□□□ 0.31
EPHA3P29320 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.01■□□□□ 0.31
EPHA3P29320 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.01■□□□□ 0.31
EPHA3P29320 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.01■□□□□ 0.31
EPHA3P29320 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EPHA3P29320 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
EPHA3P29320 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EPHA3P29320 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
EPHA3P29320 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.01■□□□□ 0.31
EPHA3P29320 AL603756.1-201ENST00000606511 2163 ntBASIC17.01■□□□□ 0.31
EPHA3P29320 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EPHA3P29320 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EPHA3P29320 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
EPHA3P29320 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17■□□□□ 0.31
EPHA3P29320 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
EPHA3P29320 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
EPHA3P29320 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms