Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GAP43P17677 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
GAP43P17677 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
GAP43P17677 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
GAP43P17677 AL135999.2-201ENST00000622438 1686 ntBASIC19.24■□□□□ 0.67
GAP43P17677 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GAP43P17677 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.24■□□□□ 0.67
GAP43P17677 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
GAP43P17677 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
GAP43P17677 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GAP43P17677 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GAP43P17677 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GAP43P17677 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GAP43P17677 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GAP43P17677 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GAP43P17677 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.24■□□□□ 0.67
GAP43P17677 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.24■□□□□ 0.67
GAP43P17677 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.24■□□□□ 0.67
GAP43P17677 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.24■□□□□ 0.67
GAP43P17677 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.24■□□□□ 0.67
GAP43P17677 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GAP43P17677 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.24■□□□□ 0.67
GAP43P17677 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.24■□□□□ 0.67
GAP43P17677 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GAP43P17677 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.24■□□□□ 0.67
GAP43P17677 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GAP43P17677 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.24■□□□□ 0.67
GAP43P17677 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
GAP43P17677 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GAP43P17677 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GAP43P17677 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GAP43P17677 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.24■□□□□ 0.67
GAP43P17677 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GAP43P17677 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GAP43P17677 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.24■□□□□ 0.67
GAP43P17677 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GAP43P17677 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.24■□□□□ 0.67
GAP43P17677 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GAP43P17677 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.23■□□□□ 0.67
GAP43P17677 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GAP43P17677 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
GAP43P17677 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
GAP43P17677 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GAP43P17677 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GAP43P17677 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
GAP43P17677 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GAP43P17677 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GAP43P17677 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GAP43P17677 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.23■□□□□ 0.67
GAP43P17677 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.23■□□□□ 0.67
GAP43P17677 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.23■□□□□ 0.67
GAP43P17677 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.23■□□□□ 0.67
GAP43P17677 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
GAP43P17677 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.23■□□□□ 0.67
GAP43P17677 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
GAP43P17677 REXO1L6P-202ENST00000619970 1078 ntBASIC19.23■□□□□ 0.67
GAP43P17677 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
GAP43P17677 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.23■□□□□ 0.67
GAP43P17677 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
GAP43P17677 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GAP43P17677 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
GAP43P17677 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.23■□□□□ 0.67
GAP43P17677 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GAP43P17677 AC108860.2-201ENST00000562760 2183 ntBASIC19.23■□□□□ 0.67
GAP43P17677 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
GAP43P17677 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
GAP43P17677 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GAP43P17677 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GAP43P17677 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.22■□□□□ 0.67
GAP43P17677 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GAP43P17677 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GAP43P17677 AC148477.5-201ENST00000625164 1645 ntBASIC19.22■□□□□ 0.67
GAP43P17677 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GAP43P17677 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GAP43P17677 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GAP43P17677 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GAP43P17677 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
GAP43P17677 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.22■□□□□ 0.67
GAP43P17677 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GAP43P17677 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
GAP43P17677 AL355877.3-201ENST00000622820 899 ntBASIC19.22■□□□□ 0.67
GAP43P17677 AL139288.1-201ENST00000623748 933 ntBASIC19.22■□□□□ 0.67
GAP43P17677 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GAP43P17677 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
GAP43P17677 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.22■□□□□ 0.67
GAP43P17677 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
GAP43P17677 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.22■□□□□ 0.67
GAP43P17677 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.22■□□□□ 0.67
GAP43P17677 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.22■□□□□ 0.67
GAP43P17677 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
GAP43P17677 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
GAP43P17677 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
GAP43P17677 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.22■□□□□ 0.67
GAP43P17677 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GAP43P17677 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GAP43P17677 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.22■□□□□ 0.67
GAP43P17677 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GAP43P17677 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
GAP43P17677 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GAP43P17677 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms