Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFRAP16234 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PDGFRAP16234 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFRAP16234 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFRAP16234 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFRAP16234 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PDGFRAP16234 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFRAP16234 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFRAP16234 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDGFRAP16234 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
PDGFRAP16234 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PDGFRAP16234 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.35■□□□□ 0.53
PDGFRAP16234 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
PDGFRAP16234 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.34■□□□□ 0.53
PDGFRAP16234 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
PDGFRAP16234 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFRAP16234 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PDGFRAP16234 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.34■□□□□ 0.53
PDGFRAP16234 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.34■□□□□ 0.53
PDGFRAP16234 AL353593.2-201ENST00000602529 1483 ntBASIC18.34■□□□□ 0.53
PDGFRAP16234 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFRAP16234 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.34■□□□□ 0.53
PDGFRAP16234 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PDGFRAP16234 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.34■□□□□ 0.53
PDGFRAP16234 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFRAP16234 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.34■□□□□ 0.53
PDGFRAP16234 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFRAP16234 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.34■□□□□ 0.53
PDGFRAP16234 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.34■□□□□ 0.53
PDGFRAP16234 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.34■□□□□ 0.53
PDGFRAP16234 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.34■□□□□ 0.53
PDGFRAP16234 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.34■□□□□ 0.53
PDGFRAP16234 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.34■□□□□ 0.53
PDGFRAP16234 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFRAP16234 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.34■□□□□ 0.53
PDGFRAP16234 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.34■□□□□ 0.53
PDGFRAP16234 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.34■□□□□ 0.53
PDGFRAP16234 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFRAP16234 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.34■□□□□ 0.53
PDGFRAP16234 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFRAP16234 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFRAP16234 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFRAP16234 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFRAP16234 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PDGFRAP16234 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFRAP16234 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFRAP16234 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFRAP16234 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDGFRAP16234 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PDGFRAP16234 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.33■□□□□ 0.53
PDGFRAP16234 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDGFRAP16234 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PDGFRAP16234 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PDGFRAP16234 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PDGFRAP16234 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.33■□□□□ 0.53
PDGFRAP16234 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.33■□□□□ 0.53
PDGFRAP16234 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFRAP16234 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFRAP16234 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFRAP16234 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.33■□□□□ 0.52
PDGFRAP16234 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PDGFRAP16234 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.33■□□□□ 0.52
PDGFRAP16234 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.33■□□□□ 0.52
PDGFRAP16234 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFRAP16234 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
PDGFRAP16234 MIR5100-201ENST00000579544 119 ntBASIC18.33■□□□□ 0.52
PDGFRAP16234 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.33■□□□□ 0.52
PDGFRAP16234 AD001527.2-201ENST00000622994 785 ntBASIC18.33■□□□□ 0.52
PDGFRAP16234 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.33■□□□□ 0.52
PDGFRAP16234 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFRAP16234 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.33■□□□□ 0.52
PDGFRAP16234 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFRAP16234 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.33■□□□□ 0.52
PDGFRAP16234 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.33■□□□□ 0.52
PDGFRAP16234 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFRAP16234 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFRAP16234 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFRAP16234 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PDGFRAP16234 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFRAP16234 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFRAP16234 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.32■□□□□ 0.52
PDGFRAP16234 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFRAP16234 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFRAP16234 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFRAP16234 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFRAP16234 KRT16P4-201ENST00000453883 522 ntBASIC18.32■□□□□ 0.52
PDGFRAP16234 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.32■□□□□ 0.52
PDGFRAP16234 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.32■□□□□ 0.52
PDGFRAP16234 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.32■□□□□ 0.52
PDGFRAP16234 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFRAP16234 RN7SL510P-201ENST00000581311 263 ntBASIC18.32■□□□□ 0.52
PDGFRAP16234 STK25P1-201ENST00000585406 838 ntBASIC18.32■□□□□ 0.52
PDGFRAP16234 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.32■□□□□ 0.52
PDGFRAP16234 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PDGFRAP16234 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.32■□□□□ 0.52
PDGFRAP16234 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PDGFRAP16234 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFRAP16234 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.32■□□□□ 0.52
PDGFRAP16234 LTB4R2-202ENST00000528054 3092 ntBASIC18.32■□□□□ 0.52
PDGFRAP16234 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms