Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC22.73■■□□□ 1.23
COL5A2P05997 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL5A2P05997 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL5A2P05997 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL5A2P05997 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC22.73■■□□□ 1.23
COL5A2P05997 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL5A2P05997 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC22.73■■□□□ 1.23
COL5A2P05997 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL5A2P05997 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL5A2P05997 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL5A2P05997 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL5A2P05997 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL5A2P05997 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC22.73■■□□□ 1.23
COL5A2P05997 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC22.73■■□□□ 1.23
COL5A2P05997 SSH2-211ENST00000590153 570 ntTSL 4 BASIC22.73■■□□□ 1.23
COL5A2P05997 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL5A2P05997 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC22.73■■□□□ 1.23
COL5A2P05997 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL5A2P05997 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL5A2P05997 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
COL5A2P05997 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC22.72■■□□□ 1.23
COL5A2P05997 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC22.72■■□□□ 1.23
COL5A2P05997 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC22.72■■□□□ 1.23
COL5A2P05997 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL5A2P05997 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC22.72■■□□□ 1.23
COL5A2P05997 IGHV3-62-201ENST00000520057 340 ntBASIC22.72■■□□□ 1.23
COL5A2P05997 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL5A2P05997 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC22.72■■□□□ 1.23
COL5A2P05997 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC22.72■■□□□ 1.23
COL5A2P05997 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL5A2P05997 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC22.72■■□□□ 1.23
COL5A2P05997 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
COL5A2P05997 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC22.72■■□□□ 1.23
COL5A2P05997 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL5A2P05997 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC22.71■■□□□ 1.23
COL5A2P05997 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL5A2P05997 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL5A2P05997 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
COL5A2P05997 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL5A2P05997 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
COL5A2P05997 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL5A2P05997 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
COL5A2P05997 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC22.71■■□□□ 1.23
COL5A2P05997 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
COL5A2P05997 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL5A2P05997 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL5A2P05997 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
COL5A2P05997 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL5A2P05997 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
COL5A2P05997 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC22.71■■□□□ 1.23
COL5A2P05997 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL5A2P05997 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
COL5A2P05997 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC22.71■■□□□ 1.23
COL5A2P05997 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC22.71■■□□□ 1.23
COL5A2P05997 ALG1L8P-201ENST00000533887 760 ntBASIC22.71■■□□□ 1.23
COL5A2P05997 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC22.71■■□□□ 1.23
COL5A2P05997 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC22.71■■□□□ 1.23
COL5A2P05997 TDG-209ENST00000544861 1387 ntTSL 2 BASIC22.71■■□□□ 1.23
COL5A2P05997 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC22.71■■□□□ 1.23
COL5A2P05997 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC22.71■■□□□ 1.23
COL5A2P05997 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC22.71■■□□□ 1.23
COL5A2P05997 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
COL5A2P05997 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL5A2P05997 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL5A2P05997 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC22.71■■□□□ 1.23
COL5A2P05997 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL5A2P05997 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.7■■□□□ 1.22
COL5A2P05997 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL5A2P05997 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC22.7■■□□□ 1.22
COL5A2P05997 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
COL5A2P05997 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
COL5A2P05997 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
COL5A2P05997 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC22.7■■□□□ 1.22
COL5A2P05997 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL5A2P05997 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
COL5A2P05997 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
COL5A2P05997 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC22.7■■□□□ 1.22
COL5A2P05997 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC22.7■■□□□ 1.22
COL5A2P05997 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC22.7■■□□□ 1.22
COL5A2P05997 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC22.7■■□□□ 1.22
COL5A2P05997 COQ9-214ENST00000567933 882 ntTSL 3 BASIC22.7■■□□□ 1.22
COL5A2P05997 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
COL5A2P05997 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL5A2P05997 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
COL5A2P05997 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC22.7■■□□□ 1.22
COL5A2P05997 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL5A2P05997 WASH6P-202ENST00000359512 1437 ntBASIC22.69■■□□□ 1.22
COL5A2P05997 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
COL5A2P05997 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
COL5A2P05997 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC22.69■■□□□ 1.22
COL5A2P05997 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
COL5A2P05997 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC22.69■■□□□ 1.22
COL5A2P05997 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COL5A2P05997 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC22.69■■□□□ 1.22
COL5A2P05997 AP000842.3-202ENST00000569238 1080 ntBASIC22.69■■□□□ 1.22
COL5A2P05997 AC025048.6-201ENST00000634326 1161 ntBASIC22.69■■□□□ 1.22
COL5A2P05997 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
COL5A2P05997 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC22.69■■□□□ 1.22
COL5A2P05997 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC22.69■■□□□ 1.22
COL5A2P05997 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms