Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRAP04437 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRAP04437 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TCRAP04437 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRAP04437 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TCRAP04437 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.32□□□□□ -0.28
TCRAP04437 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRAP04437 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.32□□□□□ -0.28
TCRAP04437 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TCRAP04437 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
TCRAP04437 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.32□□□□□ -0.28
TCRAP04437 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC13.32□□□□□ -0.28
TCRAP04437 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TCRAP04437 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TCRAP04437 AC008894.3-201ENST00000624324 3103 ntBASIC13.32□□□□□ -0.28
TCRAP04437 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TCRAP04437 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TCRAP04437 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.32□□□□□ -0.28
TCRAP04437 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TCRAP04437 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRAP04437 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TCRAP04437 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TCRAP04437 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC13.32□□□□□ -0.28
TCRAP04437 AP003071.4-201ENST00000562276 1284 ntBASIC13.32□□□□□ -0.28
TCRAP04437 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC13.32□□□□□ -0.28
TCRAP04437 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC13.32□□□□□ -0.28
TCRAP04437 AL139327.4-201ENST00000612362 153 ntBASIC13.32□□□□□ -0.28
TCRAP04437 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.32□□□□□ -0.28
TCRAP04437 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRAP04437 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRAP04437 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.32□□□□□ -0.28
TCRAP04437 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRAP04437 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRAP04437 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TCRAP04437 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRAP04437 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.32□□□□□ -0.28
TCRAP04437 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRAP04437 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TCRAP04437 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TCRAP04437 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TCRAP04437 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRAP04437 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRAP04437 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TCRAP04437 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRAP04437 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TCRAP04437 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TCRAP04437 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.31□□□□□ -0.28
TCRAP04437 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.31□□□□□ -0.28
TCRAP04437 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.31□□□□□ -0.28
TCRAP04437 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.31□□□□□ -0.28
TCRAP04437 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC13.31□□□□□ -0.28
TCRAP04437 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRAP04437 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TCRAP04437 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRAP04437 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRAP04437 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC13.31□□□□□ -0.28
TCRAP04437 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRAP04437 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.31□□□□□ -0.28
TCRAP04437 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRAP04437 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRAP04437 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.31□□□□□ -0.28
TCRAP04437 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TCRAP04437 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRAP04437 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.31□□□□□ -0.28
TCRAP04437 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRAP04437 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC13.31□□□□□ -0.28
TCRAP04437 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TCRAP04437 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC13.31□□□□□ -0.28
TCRAP04437 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC13.31□□□□□ -0.28
TCRAP04437 AC009947.2-201ENST00000444014 672 ntBASIC13.31□□□□□ -0.28
TCRAP04437 RBM17P1-201ENST00000453646 1190 ntBASIC13.31□□□□□ -0.28
TCRAP04437 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRAP04437 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TCRAP04437 CD99P1-205ENST00000527459 561 ntBASIC13.31□□□□□ -0.28
TCRAP04437 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC13.31□□□□□ -0.28
TCRAP04437 C2orf69P3-201ENST00000565542 1120 ntBASIC13.31□□□□□ -0.28
TCRAP04437 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC13.31□□□□□ -0.28
TCRAP04437 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC13.31□□□□□ -0.28
TCRAP04437 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TCRAP04437 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRAP04437 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRAP04437 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TCRAP04437 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TCRAP04437 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRAP04437 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TCRAP04437 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TCRAP04437 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC13.31□□□□□ -0.28
TCRAP04437 CICP6-201ENST00000457191 2729 ntBASIC13.31□□□□□ -0.28
TCRAP04437 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRAP04437 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.31□□□□□ -0.28
TCRAP04437 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TCRAP04437 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TCRAP04437 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRAP04437 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRAP04437 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TCRAP04437 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC13.3□□□□□ -0.28
TCRAP04437 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.3□□□□□ -0.28
TCRAP04437 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms