Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CROCCP1-201ENST00000426910 5675 ntBASIC15.97■□□□□ 0.15
P04436 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.97■□□□□ 0.15
P04436 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.97■□□□□ 0.15
P04436 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
P04436 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.97■□□□□ 0.15
P04436 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
P04436 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
P04436 AC148477.5-201ENST00000625164 1645 ntBASIC15.97■□□□□ 0.15
P04436 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
P04436 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.97■□□□□ 0.15
P04436 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.96■□□□□ 0.15
P04436 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
P04436 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
P04436 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
P04436 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.96■□□□□ 0.15
P04436 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
P04436 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.96■□□□□ 0.15
P04436 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
P04436 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
P04436 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.96■□□□□ 0.15
P04436 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
P04436 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
P04436 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
P04436 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
P04436 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.96■□□□□ 0.15
P04436 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
P04436 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.96■□□□□ 0.15
P04436 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.96■□□□□ 0.15
P04436 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.96■□□□□ 0.15
P04436 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
P04436 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.96■□□□□ 0.15
P04436 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.96■□□□□ 0.15
P04436 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.96■□□□□ 0.15
P04436 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.96■□□□□ 0.15
P04436 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
P04436 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.96■□□□□ 0.15
P04436 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
P04436 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
P04436 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
P04436 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
P04436 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.96■□□□□ 0.15
P04436 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
P04436 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
P04436 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
P04436 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
P04436 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
P04436 REXO1L11P-201ENST00000620964 1927 ntBASIC15.96■□□□□ 0.14
P04436 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
P04436 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
P04436 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
P04436 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
P04436 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.95■□□□□ 0.14
P04436 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
P04436 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
P04436 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
P04436 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
P04436 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
P04436 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
P04436 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
P04436 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
P04436 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
P04436 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
P04436 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.95■□□□□ 0.14
P04436 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.95■□□□□ 0.14
P04436 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.95■□□□□ 0.14
P04436 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.95■□□□□ 0.14
P04436 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
P04436 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
P04436 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
P04436 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.95■□□□□ 0.14
P04436 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
P04436 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
P04436 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.95■□□□□ 0.14
P04436 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
P04436 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
P04436 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
P04436 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
P04436 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
P04436 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
P04436 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
P04436 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
P04436 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
P04436 AC012317.2-201ENST00000623305 2251 ntBASIC15.94■□□□□ 0.14
P04436 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
P04436 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.94■□□□□ 0.14
P04436 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.94■□□□□ 0.14
P04436 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.94■□□□□ 0.14
P04436 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
P04436 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
P04436 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
P04436 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
P04436 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
P04436 NEFHP1-201ENST00000412845 2629 ntBASIC15.94■□□□□ 0.14
P04436 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
P04436 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
P04436 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
P04436 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.94■□□□□ 0.14
P04436 AP000347.1-202ENST00000435868 847 ntBASIC15.94■□□□□ 0.14
P04436 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.94■□□□□ 0.14
P04436 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms