Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DRAP01903 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
HLA-DRAP01903 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DRAP01903 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DRAP01903 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DRAP01903 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DRAP01903 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.77■□□□□ 0.6
HLA-DRAP01903 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DRAP01903 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DRAP01903 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DRAP01903 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
HLA-DRAP01903 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DRAP01903 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DRAP01903 SIGLEC16-201ENST00000599858 1437 ntBASIC18.77■□□□□ 0.6
HLA-DRAP01903 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DRAP01903 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.77■□□□□ 0.6
HLA-DRAP01903 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.77■□□□□ 0.6
HLA-DRAP01903 AC108860.2-201ENST00000562760 2183 ntBASIC18.77■□□□□ 0.6
HLA-DRAP01903 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DRAP01903 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DRAP01903 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DRAP01903 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.77■□□□□ 0.6
HLA-DRAP01903 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DRAP01903 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.77■□□□□ 0.6
HLA-DRAP01903 SAPCD2P3-201ENST00000455031 850 ntBASIC18.77■□□□□ 0.6
HLA-DRAP01903 AF238378.1-201ENST00000526806 358 ntBASIC18.77■□□□□ 0.6
HLA-DRAP01903 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DRAP01903 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DRAP01903 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.77■□□□□ 0.6
HLA-DRAP01903 AC008608.2-201ENST00000606089 416 ntBASIC18.77■□□□□ 0.6
HLA-DRAP01903 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.77■□□□□ 0.6
HLA-DRAP01903 AL355877.3-201ENST00000622820 899 ntBASIC18.77■□□□□ 0.6
HLA-DRAP01903 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DRAP01903 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DRAP01903 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DRAP01903 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.77■□□□□ 0.6
HLA-DRAP01903 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.77■□□□□ 0.6
HLA-DRAP01903 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DRAP01903 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HLA-DRAP01903 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HLA-DRAP01903 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.76■□□□□ 0.59
HLA-DRAP01903 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
HLA-DRAP01903 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HLA-DRAP01903 AL135999.2-201ENST00000622438 1686 ntBASIC18.76■□□□□ 0.59
HLA-DRAP01903 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DRAP01903 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.76■□□□□ 0.59
HLA-DRAP01903 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
HLA-DRAP01903 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.76■□□□□ 0.59
HLA-DRAP01903 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DRAP01903 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
HLA-DRAP01903 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DRAP01903 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DRAP01903 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DRAP01903 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DRAP01903 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DRAP01903 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DRAP01903 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DRAP01903 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
HLA-DRAP01903 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.76■□□□□ 0.59
HLA-DRAP01903 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.76■□□□□ 0.59
HLA-DRAP01903 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DRAP01903 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DRAP01903 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DRAP01903 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DRAP01903 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DRAP01903 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DRAP01903 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
HLA-DRAP01903 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DRAP01903 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DRAP01903 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DRAP01903 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DRAP01903 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DRAP01903 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
HLA-DRAP01903 AC004817.3-201ENST00000602957 2129 ntBASIC18.76■□□□□ 0.59
HLA-DRAP01903 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DRAP01903 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.76■□□□□ 0.59
HLA-DRAP01903 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HLA-DRAP01903 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
HLA-DRAP01903 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DRAP01903 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.75■□□□□ 0.59
HLA-DRAP01903 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HLA-DRAP01903 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DRAP01903 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
HLA-DRAP01903 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DRAP01903 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DRAP01903 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
HLA-DRAP01903 SIGLEC30P-201ENST00000455569 941 ntBASIC18.75■□□□□ 0.59
HLA-DRAP01903 FGFR3P6-201ENST00000457012 610 ntBASIC18.75■□□□□ 0.59
HLA-DRAP01903 BX005266.1-201ENST00000473402 457 ntBASIC18.75■□□□□ 0.59
HLA-DRAP01903 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.75■□□□□ 0.59
HLA-DRAP01903 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.75■□□□□ 0.59
HLA-DRAP01903 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DRAP01903 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DRAP01903 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.75■□□□□ 0.59
HLA-DRAP01903 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DRAP01903 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DRAP01903 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DRAP01903 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DRAP01903 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DRAP01903 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms