Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLPXO76031 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CLPXO76031 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLPXO76031 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLPXO76031 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLPXO76031 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLPXO76031 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLPXO76031 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLPXO76031 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLPXO76031 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CLPXO76031 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.91■□□□□ 0.14
CLPXO76031 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLPXO76031 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CLPXO76031 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLPXO76031 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CLPXO76031 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CLPXO76031 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.91■□□□□ 0.14
CLPXO76031 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.91■□□□□ 0.14
CLPXO76031 MIR4785-201ENST00000585005 73 ntBASIC15.91■□□□□ 0.14
CLPXO76031 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.91■□□□□ 0.14
CLPXO76031 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.91■□□□□ 0.14
CLPXO76031 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.91■□□□□ 0.14
CLPXO76031 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLPXO76031 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLPXO76031 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLPXO76031 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLPXO76031 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLPXO76031 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CLPXO76031 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CLPXO76031 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.91■□□□□ 0.14
CLPXO76031 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLPXO76031 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLPXO76031 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CLPXO76031 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.91■□□□□ 0.14
CLPXO76031 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.91■□□□□ 0.14
CLPXO76031 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.91■□□□□ 0.14
CLPXO76031 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPXO76031 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
CLPXO76031 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
CLPXO76031 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPXO76031 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPXO76031 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPXO76031 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CLPXO76031 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPXO76031 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CLPXO76031 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.9■□□□□ 0.14
CLPXO76031 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPXO76031 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPXO76031 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPXO76031 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPXO76031 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CLPXO76031 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLPXO76031 TSPY7P-201ENST00000431358 1114 ntBASIC15.9■□□□□ 0.14
CLPXO76031 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPXO76031 AP002982.1-201ENST00000492365 877 ntBASIC15.9■□□□□ 0.14
CLPXO76031 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPXO76031 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.9■□□□□ 0.14
CLPXO76031 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.9■□□□□ 0.14
CLPXO76031 RARRES2P10-201ENST00000564312 460 ntBASIC15.9■□□□□ 0.14
CLPXO76031 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CLPXO76031 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.9■□□□□ 0.14
CLPXO76031 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.9■□□□□ 0.14
CLPXO76031 LINC02228-204ENST00000642115 2962 ntBASIC15.9■□□□□ 0.14
CLPXO76031 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPXO76031 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CLPXO76031 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPXO76031 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPXO76031 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.9■□□□□ 0.14
CLPXO76031 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CLPXO76031 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLPXO76031 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CLPXO76031 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.9■□□□□ 0.14
CLPXO76031 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPXO76031 AC099063.4-201ENST00000641099 1602 ntBASIC15.9■□□□□ 0.14
CLPXO76031 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPXO76031 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.9■□□□□ 0.14
CLPXO76031 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPXO76031 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPXO76031 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPXO76031 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLPXO76031 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPXO76031 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CLPXO76031 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.89■□□□□ 0.13
CLPXO76031 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPXO76031 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPXO76031 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPXO76031 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC15.89■□□□□ 0.13
CLPXO76031 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLPXO76031 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPXO76031 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLPXO76031 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLPXO76031 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPXO76031 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CLPXO76031 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLPXO76031 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPXO76031 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPXO76031 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPXO76031 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLPXO76031 MIR1224-201ENST00000408193 85 ntBASIC15.89■□□□□ 0.13
CLPXO76031 NIFKP9-201ENST00000419265 221 ntBASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms