Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTNND1O60716 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CTNND1O60716 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
CTNND1O60716 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTNND1O60716 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTNND1O60716 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTNND1O60716 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CTNND1O60716 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.31■□□□□ 0.84
CTNND1O60716 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.31■□□□□ 0.84
CTNND1O60716 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.31■□□□□ 0.84
CTNND1O60716 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTNND1O60716 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTNND1O60716 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTNND1O60716 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CTNND1O60716 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CTNND1O60716 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.31■□□□□ 0.84
CTNND1O60716 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.31■□□□□ 0.84
CTNND1O60716 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.31■□□□□ 0.84
CTNND1O60716 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.31■□□□□ 0.84
CTNND1O60716 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CTNND1O60716 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.31■□□□□ 0.84
CTNND1O60716 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.31■□□□□ 0.84
CTNND1O60716 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.31■□□□□ 0.84
CTNND1O60716 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.31■□□□□ 0.84
CTNND1O60716 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.31■□□□□ 0.84
CTNND1O60716 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.31■□□□□ 0.84
CTNND1O60716 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CTNND1O60716 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
CTNND1O60716 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.31■□□□□ 0.84
CTNND1O60716 AL135999.2-201ENST00000622438 1686 ntBASIC20.31■□□□□ 0.84
CTNND1O60716 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTNND1O60716 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.31■□□□□ 0.84
CTNND1O60716 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.31■□□□□ 0.84
CTNND1O60716 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTNND1O60716 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.31■□□□□ 0.84
CTNND1O60716 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.31■□□□□ 0.84
CTNND1O60716 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTNND1O60716 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.3■□□□□ 0.84
CTNND1O60716 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.3■□□□□ 0.84
CTNND1O60716 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTNND1O60716 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTNND1O60716 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTNND1O60716 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CTNND1O60716 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTNND1O60716 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTNND1O60716 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CTNND1O60716 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTNND1O60716 AC046185.3-201ENST00000623228 1824 ntBASIC20.3■□□□□ 0.84
CTNND1O60716 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.3■□□□□ 0.84
CTNND1O60716 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CTNND1O60716 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTNND1O60716 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTNND1O60716 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.3■□□□□ 0.84
CTNND1O60716 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.3■□□□□ 0.84
CTNND1O60716 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.3■□□□□ 0.84
CTNND1O60716 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.3■□□□□ 0.84
CTNND1O60716 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CTNND1O60716 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CTNND1O60716 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.3■□□□□ 0.84
CTNND1O60716 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.3■□□□□ 0.84
CTNND1O60716 AC068137.2-201ENST00000605408 478 ntBASIC20.3■□□□□ 0.84
CTNND1O60716 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.3■□□□□ 0.84
CTNND1O60716 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CTNND1O60716 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CTNND1O60716 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CTNND1O60716 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTNND1O60716 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTNND1O60716 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTNND1O60716 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
CTNND1O60716 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.3■□□□□ 0.84
CTNND1O60716 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTNND1O60716 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTNND1O60716 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTNND1O60716 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTNND1O60716 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
CTNND1O60716 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.3■□□□□ 0.84
CTNND1O60716 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CTNND1O60716 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTNND1O60716 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.29■□□□□ 0.84
CTNND1O60716 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTNND1O60716 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CTNND1O60716 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTNND1O60716 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.29■□□□□ 0.84
CTNND1O60716 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTNND1O60716 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTNND1O60716 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CTNND1O60716 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTNND1O60716 PAWRP1-201ENST00000451083 565 ntBASIC20.29■□□□□ 0.84
CTNND1O60716 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.29■□□□□ 0.84
CTNND1O60716 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTNND1O60716 AL513210.1-201ENST00000629608 234 ntBASIC20.29■□□□□ 0.84
CTNND1O60716 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.29■□□□□ 0.84
CTNND1O60716 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTNND1O60716 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTNND1O60716 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTNND1O60716 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
CTNND1O60716 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.29■□□□□ 0.84
CTNND1O60716 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTNND1O60716 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND1O60716 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms