Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
GFRA3O60609 BRWD1P1-201ENST00000401091 371 ntBASIC16.8■□□□□ 0.28
GFRA3O60609 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.8■□□□□ 0.28
GFRA3O60609 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GFRA3O60609 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.8■□□□□ 0.28
GFRA3O60609 AC099548.2-209ENST00000480264 625 ntBASIC16.8■□□□□ 0.28
GFRA3O60609 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.8■□□□□ 0.28
GFRA3O60609 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GFRA3O60609 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.8■□□□□ 0.28
GFRA3O60609 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.8■□□□□ 0.28
GFRA3O60609 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.8■□□□□ 0.28
GFRA3O60609 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.8■□□□□ 0.28
GFRA3O60609 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GFRA3O60609 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.8■□□□□ 0.28
GFRA3O60609 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
GFRA3O60609 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GFRA3O60609 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.8■□□□□ 0.28
GFRA3O60609 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GFRA3O60609 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GFRA3O60609 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GFRA3O60609 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
GFRA3O60609 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
GFRA3O60609 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.79■□□□□ 0.28
GFRA3O60609 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.79■□□□□ 0.28
GFRA3O60609 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.79■□□□□ 0.28
GFRA3O60609 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
GFRA3O60609 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.79■□□□□ 0.28
GFRA3O60609 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
GFRA3O60609 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GFRA3O60609 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GFRA3O60609 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.79■□□□□ 0.28
GFRA3O60609 MYCLP1-201ENST00000372451 1075 ntBASIC16.79■□□□□ 0.28
GFRA3O60609 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.79■□□□□ 0.28
GFRA3O60609 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GFRA3O60609 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.79■□□□□ 0.28
GFRA3O60609 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GFRA3O60609 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.79■□□□□ 0.28
GFRA3O60609 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.79■□□□□ 0.28
GFRA3O60609 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.79■□□□□ 0.28
GFRA3O60609 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GFRA3O60609 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.79■□□□□ 0.28
GFRA3O60609 AC008267.7-201ENST00000624570 1194 ntBASIC16.79■□□□□ 0.28
GFRA3O60609 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GFRA3O60609 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
GFRA3O60609 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GFRA3O60609 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GFRA3O60609 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.79■□□□□ 0.28
GFRA3O60609 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GFRA3O60609 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
GFRA3O60609 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GFRA3O60609 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GFRA3O60609 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.78■□□□□ 0.28
GFRA3O60609 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.78■□□□□ 0.28
GFRA3O60609 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GFRA3O60609 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GFRA3O60609 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
GFRA3O60609 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GFRA3O60609 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
GFRA3O60609 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GFRA3O60609 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GFRA3O60609 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GFRA3O60609 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GFRA3O60609 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GFRA3O60609 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.78■□□□□ 0.28
GFRA3O60609 RNA5SP423-201ENST00000517127 109 ntBASIC16.78■□□□□ 0.28
GFRA3O60609 AC104989.1-201ENST00000519711 778 ntBASIC16.78■□□□□ 0.28
GFRA3O60609 IGHV3-52-201ENST00000519770 353 ntBASIC16.78■□□□□ 0.28
GFRA3O60609 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.78■□□□□ 0.28
GFRA3O60609 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.78■□□□□ 0.28
GFRA3O60609 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.78■□□□□ 0.28
GFRA3O60609 MIR4515-201ENST00000584082 81 ntBASIC16.78■□□□□ 0.28
GFRA3O60609 AC027307.2-201ENST00000591252 911 ntBASIC16.78■□□□□ 0.28
GFRA3O60609 CHCHD2P3-201ENST00000603038 451 ntBASIC16.78■□□□□ 0.28
GFRA3O60609 AC007431.3-201ENST00000623221 587 ntBASIC16.78■□□□□ 0.28
GFRA3O60609 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.78■□□□□ 0.28
GFRA3O60609 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
GFRA3O60609 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
GFRA3O60609 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GFRA3O60609 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GFRA3O60609 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GFRA3O60609 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.78■□□□□ 0.28
GFRA3O60609 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GFRA3O60609 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GFRA3O60609 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GFRA3O60609 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GFRA3O60609 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.78■□□□□ 0.28
GFRA3O60609 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
GFRA3O60609 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GFRA3O60609 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.78■□□□□ 0.28
GFRA3O60609 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GFRA3O60609 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GFRA3O60609 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GFRA3O60609 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
GFRA3O60609 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GFRA3O60609 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
GFRA3O60609 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.77■□□□□ 0.28
GFRA3O60609 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
GFRA3O60609 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GFRA3O60609 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GFRA3O60609 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms