Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 AC116407.2-201ENST00000613639 860 ntBASIC12.82□□□□□ -0.36
SMKR1H3BMG3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 RHBDF1P1-201ENST00000427504 1941 ntBASIC12.82□□□□□ -0.36
SMKR1H3BMG3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMKR1H3BMG3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 AC009065.1-201ENST00000564055 1225 ntBASIC12.81□□□□□ -0.36
SMKR1H3BMG3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 SLC25A1P4-201ENST00000567977 778 ntBASIC12.81□□□□□ -0.36
SMKR1H3BMG3 AP000692.2-201ENST00000608391 879 ntBASIC12.81□□□□□ -0.36
SMKR1H3BMG3 GXYLT1P5-201ENST00000614548 1189 ntBASIC12.81□□□□□ -0.36
SMKR1H3BMG3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.81□□□□□ -0.36
SMKR1H3BMG3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SMKR1H3BMG3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMKR1H3BMG3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMKR1H3BMG3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMKR1H3BMG3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms