Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 AL020989.1-201ENST00000422979 469 ntBASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 AC025678.2-201ENST00000562061 970 ntBASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 HCG11-201ENST00000411553 5696 ntBASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRABD2BA6NFA1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.77■□□□□ 0.28
TRABD2BA6NFA1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRABD2BA6NFA1 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.77■□□□□ 0.28
TRABD2BA6NFA1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRABD2BA6NFA1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
TRABD2BA6NFA1 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRABD2BA6NFA1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRABD2BA6NFA1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.77■□□□□ 0.28
TRABD2BA6NFA1 IGLL3P-201ENST00000412472 434 ntBASIC16.77■□□□□ 0.28
TRABD2BA6NFA1 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.77■□□□□ 0.28
TRABD2BA6NFA1 AC103564.2-201ENST00000432853 1299 ntBASIC16.77■□□□□ 0.28
TRABD2BA6NFA1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.77■□□□□ 0.28
TRABD2BA6NFA1 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRABD2BA6NFA1 HLA-J-202ENST00000469281 1241 ntBASIC16.77■□□□□ 0.28
TRABD2BA6NFA1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRABD2BA6NFA1 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.77■□□□□ 0.28
TRABD2BA6NFA1 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
TRABD2BA6NFA1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.77■□□□□ 0.28
TRABD2BA6NFA1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TRABD2BA6NFA1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRABD2BA6NFA1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.77■□□□□ 0.28
TRABD2BA6NFA1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRABD2BA6NFA1 AL354751.1-201ENST00000412768 1863 ntBASIC16.77■□□□□ 0.27
TRABD2BA6NFA1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.77■□□□□ 0.27
TRABD2BA6NFA1 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRABD2BA6NFA1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.77■□□□□ 0.27
TRABD2BA6NFA1 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRABD2BA6NFA1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.77■□□□□ 0.27
TRABD2BA6NFA1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRABD2BA6NFA1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.77■□□□□ 0.27
TRABD2BA6NFA1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
TRABD2BA6NFA1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRABD2BA6NFA1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRABD2BA6NFA1 AC010460.3-201ENST00000511359 1579 ntBASIC16.77■□□□□ 0.27
TRABD2BA6NFA1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TRABD2BA6NFA1 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.77■□□□□ 0.27
TRABD2BA6NFA1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 AC096633.1-201ENST00000422446 749 ntBASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 KRT19P2-202ENST00000557173 1012 ntBASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 AC096734.2-201ENST00000562054 433 ntBASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 AC005498.2-205ENST00000593218 784 ntBASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRABD2BA6NFA1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms