Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.7■□□□□ 0.42
TBC1D3BA6NDS4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.7■□□□□ 0.42
TBC1D3BA6NDS4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TBC1D3BA6NDS4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.7■□□□□ 0.42
TBC1D3BA6NDS4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TBC1D3BA6NDS4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.7■□□□□ 0.42
TBC1D3BA6NDS4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.7■□□□□ 0.42
TBC1D3BA6NDS4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TBC1D3BA6NDS4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.7■□□□□ 0.42
TBC1D3BA6NDS4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TBC1D3BA6NDS4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TBC1D3BA6NDS4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TBC1D3BA6NDS4 PI4KAP1-204ENST00000612579 1703 ntBASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 DNAJB3-202ENST00000449667 1266 ntBASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 AL513190.1-201ENST00000621254 727 ntBASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 PKD1P1-201ENST00000458669 6805 ntBASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3BA6NDS4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 AL596442.2-201ENST00000610240 980 ntBASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.68■□□□□ 0.42
TBC1D3BA6NDS4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TBC1D3BA6NDS4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TBC1D3BA6NDS4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TBC1D3BA6NDS4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TBC1D3BA6NDS4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TBC1D3BA6NDS4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TBC1D3BA6NDS4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.67■□□□□ 0.42
TBC1D3BA6NDS4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TBC1D3BA6NDS4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.67■□□□□ 0.42
TBC1D3BA6NDS4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
TBC1D3BA6NDS4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TBC1D3BA6NDS4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.67■□□□□ 0.42
TBC1D3BA6NDS4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.67■□□□□ 0.42
TBC1D3BA6NDS4 C20orf181-201ENST00000623918 480 ntBASIC17.67■□□□□ 0.42
TBC1D3BA6NDS4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
TBC1D3BA6NDS4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms