Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 RBM17P3-201ENST00000417687 1192 ntBASIC16.6■□□□□ 0.25
LRIT2A6NDA9 AL020989.1-201ENST00000422979 469 ntBASIC16.6■□□□□ 0.25
LRIT2A6NDA9 DUSP5P1-201ENST00000441325 1139 ntBASIC16.6■□□□□ 0.25
LRIT2A6NDA9 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRIT2A6NDA9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 UNC93B7-201ENST00000509439 705 ntBASIC16.59■□□□□ 0.25
LRIT2A6NDA9 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 REXO1L6P-202ENST00000619970 1078 ntBASIC16.59■□□□□ 0.25
LRIT2A6NDA9 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 AC148477.5-201ENST00000625164 1645 ntBASIC16.59■□□□□ 0.25
LRIT2A6NDA9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 AL135999.2-201ENST00000622438 1686 ntBASIC16.59■□□□□ 0.25
LRIT2A6NDA9 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRIT2A6NDA9 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRIT2A6NDA9 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
LRIT2A6NDA9 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.58■□□□□ 0.25
LRIT2A6NDA9 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LRIT2A6NDA9 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.58■□□□□ 0.25
LRIT2A6NDA9 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
LRIT2A6NDA9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRIT2A6NDA9 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRIT2A6NDA9 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRIT2A6NDA9 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.58■□□□□ 0.24
LRIT2A6NDA9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.58■□□□□ 0.24
LRIT2A6NDA9 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.58■□□□□ 0.24
LRIT2A6NDA9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.58■□□□□ 0.24
LRIT2A6NDA9 SIGLEC30P-201ENST00000455569 941 ntBASIC16.58■□□□□ 0.24
LRIT2A6NDA9 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.58■□□□□ 0.24
LRIT2A6NDA9 MTDHP3-201ENST00000594186 672 ntBASIC16.58■□□□□ 0.24
LRIT2A6NDA9 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms