Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.25■□□□□ 0.03
SHISA3A0PJX4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 AL513477.1-201ENST00000602865 2407 ntBASIC15.24■□□□□ 0.03
SHISA3A0PJX4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SHISA3A0PJX4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SHISA3A0PJX4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.23■□□□□ 0.03
SHISA3A0PJX4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHISA3A0PJX4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHISA3A0PJX4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHISA3A0PJX4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHISA3A0PJX4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHISA3A0PJX4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SHISA3A0PJX4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SHISA3A0PJX4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHISA3A0PJX4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.23■□□□□ 0.03
SHISA3A0PJX4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.23■□□□□ 0.03
SHISA3A0PJX4 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.23■□□□□ 0.03
SHISA3A0PJX4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SHISA3A0PJX4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.23■□□□□ 0.03
SHISA3A0PJX4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.23■□□□□ 0.03
SHISA3A0PJX4 ITM2C-210ENST00000620962 501 ntBASIC15.23■□□□□ 0.03
SHISA3A0PJX4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.23■□□□□ 0.03
SHISA3A0PJX4 AL157888.1-201ENST00000631930 593 ntBASIC15.23■□□□□ 0.03
SHISA3A0PJX4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SHISA3A0PJX4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
SHISA3A0PJX4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHISA3A0PJX4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SHISA3A0PJX4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHISA3A0PJX4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.23■□□□□ 0.03
SHISA3A0PJX4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHISA3A0PJX4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHISA3A0PJX4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHISA3A0PJX4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.23■□□□□ 0.03
SHISA3A0PJX4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 FAM197Y4-202ENST00000622692 608 ntBASIC15.22■□□□□ 0.03
SHISA3A0PJX4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms