Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC196A0A1B0GTZ2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.33■□□□□ 0.85
CCDC196A0A1B0GTZ2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
CCDC196A0A1B0GTZ2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.33■□□□□ 0.85
CCDC196A0A1B0GTZ2 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.33■□□□□ 0.85
CCDC196A0A1B0GTZ2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC196A0A1B0GTZ2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC196A0A1B0GTZ2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC196A0A1B0GTZ2 AP005117.1-201ENST00000584346 1413 ntBASIC20.33■□□□□ 0.84
CCDC196A0A1B0GTZ2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.33■□□□□ 0.84
CCDC196A0A1B0GTZ2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC196A0A1B0GTZ2 AC141586.5-201ENST00000624546 2050 ntBASIC20.33■□□□□ 0.84
CCDC196A0A1B0GTZ2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC196A0A1B0GTZ2 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CCDC196A0A1B0GTZ2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC196A0A1B0GTZ2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC196A0A1B0GTZ2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
CCDC196A0A1B0GTZ2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
CCDC196A0A1B0GTZ2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC196A0A1B0GTZ2 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC196A0A1B0GTZ2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC196A0A1B0GTZ2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC196A0A1B0GTZ2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC196A0A1B0GTZ2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC196A0A1B0GTZ2 RBM17P3-201ENST00000417687 1192 ntBASIC20.32■□□□□ 0.84
CCDC196A0A1B0GTZ2 AL020989.1-201ENST00000422979 469 ntBASIC20.32■□□□□ 0.84
CCDC196A0A1B0GTZ2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.32■□□□□ 0.84
CCDC196A0A1B0GTZ2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC196A0A1B0GTZ2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC196A0A1B0GTZ2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC196A0A1B0GTZ2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC196A0A1B0GTZ2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC196A0A1B0GTZ2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CCDC196A0A1B0GTZ2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CCDC196A0A1B0GTZ2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CCDC196A0A1B0GTZ2 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC196A0A1B0GTZ2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC196A0A1B0GTZ2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC196A0A1B0GTZ2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 SIGLEC16-201ENST00000599858 1437 ntBASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 SPDYE21P-201ENST00000413323 827 ntBASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC196A0A1B0GTZ2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC196A0A1B0GTZ2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC196A0A1B0GTZ2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC196A0A1B0GTZ2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC196A0A1B0GTZ2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC196A0A1B0GTZ2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC196A0A1B0GTZ2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC196A0A1B0GTZ2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC196A0A1B0GTZ2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC196A0A1B0GTZ2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC196A0A1B0GTZ2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
CCDC196A0A1B0GTZ2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC196A0A1B0GTZ2 SIGLEC30P-201ENST00000455569 941 ntBASIC20.3■□□□□ 0.84
CCDC196A0A1B0GTZ2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.3■□□□□ 0.84
CCDC196A0A1B0GTZ2 AL732292.2-201ENST00000609649 430 ntBASIC20.3■□□□□ 0.84
CCDC196A0A1B0GTZ2 AC073592.4-201ENST00000623827 446 ntBASIC20.3■□□□□ 0.84
CCDC196A0A1B0GTZ2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC196A0A1B0GTZ2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC196A0A1B0GTZ2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CCDC196A0A1B0GTZ2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC196A0A1B0GTZ2 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC196A0A1B0GTZ2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC196A0A1B0GTZ2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC196A0A1B0GTZ2 AC139713.2-201ENST00000641328 2723 ntBASIC20.3■□□□□ 0.84
CCDC196A0A1B0GTZ2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC196A0A1B0GTZ2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC196A0A1B0GTZ2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC196A0A1B0GTZ2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC196A0A1B0GTZ2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC196A0A1B0GTZ2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC196A0A1B0GTZ2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC196A0A1B0GTZ2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms